Streptomyces durmitorensis: M4V62_25275
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Entry
M4V62_25275 CDS
T08503
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sdur
Streptomyces durmitorensis
Brite
KEGG Orthology (KO) [BR:
sdur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdur03021
]
M4V62_25275
Transcription machinery [BR:
sdur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M4V62_25275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_24
MarR_2
HTH_10
HTH_3
Sigma70_ECF
MarR
DUF7343
IF2_N
GerE
Apolipoprotein
KORA
Motif
Other DBs
NCBI-ProteinID:
UQT58132
LinkDB
All DBs
Position
complement(5631074..5632045)
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AA seq
323 aa
AA seq
DB search
MEDTMSPRLDESRTDRATSTLSPNRIETEIPGPRTEATPDNVPALTSVPEAEALEGLADL
PEIPPFDEVGPLDARALSKTLFERLESLEEGTHEYAYVRNTLVELNLALVKFAASRFRSR
SEPMEDIIQVGTIGLIKAIDRFELSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQ
ELRLDLAKAGDELAQQFDRAPTVGELAERLGISNDEVVEGMAASNAYTASSLDAQPEEDD
SEGALADRIGYEDHGLEGIEYVESLKPLIAELPSRDRKILSLRFVANMTQSEIGEELGIS
QMHVSRLLSRTLVKLRKGLTVDE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaccatgtcaccccggctcgacgaatcgcgcactgaccgagcgacgtcgaca
ctctcaccgaaccgtatcgagaccgagatcccgggtccccgcacggaagccacgccggac
aacgtcccggccctgacgtccgtaccggaggcggaagcccttgagggcctcgccgacctg
cctgagatcccgccgttcgacgaggtgggaccgctggatgcgagggctctttccaagacc
ctcttcgaacgcctcgagtcgctcgaggaaggcacgcacgagtacgcgtacgtgcgcaac
accctggtagaactcaacctcgccctggtcaagttcgccgcctcccggttccgctcccgc
agcgagccgatggaggacatcatccaggtcggcaccatcggcctgatcaaggcgatcgac
cgcttcgagctcagccgcggcgtcgagttccccaccttcgcgatgccgaccatcgtcggc
gagatcaagcgcttcttccgcgacacgagttggtcggtgcgcgtcccgcgccgccttcag
gaactccgactggacctcgccaaggcgggcgacgaactcgcccagcaattcgatcgcgcc
cccacggtgggcgagctcgccgagcgcctgggcatctccaacgacgaggtcgtcgaaggc
atggcggcgtccaacgcctacacggcgagctcgctggacgcccagcccgaggaggacgac
tccgagggcgcgctcgcggaccggatcggctacgaggaccacggactcgaaggcatcgag
tacgtcgagtcgttgaagccgctgatcgccgaactcccgtcccgtgaccggaagatcctc
tcgctccgcttcgtcgccaacatgacgcagtcggagataggcgaagagctcggcatctcg
cagatgcatgtgtcgcgactgctgtcgcggactctcgtcaagttgcgcaagggattgact
gtcgacgagtga
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integrated database retrieval system
