Streptomyces durmitorensis: M4V62_30535
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Entry
M4V62_30535 CDS
T08503
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sdur
Streptomyces durmitorensis
Pathway
sdur03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M4V62_30535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdur03400
]
M4V62_30535
Enzymes [BR:
sdur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
M4V62_30535
DNA repair and recombination proteins [BR:
sdur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
M4V62_30535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UQT59045
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All DBs
Position
complement(6849459..6850358)
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AA seq
299 aa
AA seq
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MSSNKSPSTVSRGTLSRNPVGGHVPVAGGLASVGLSYARELGAEAVQVFVANPRGWATPP
GNPKQDEEFRAACAAENIPAYVHAPYLINFGSHTEATAEKSVESLRHSLRRAREIGALGV
VVHTGSATGGRDRAVALKQVRDRMLPLLDELTHDDDPYLLLESTAGQGFSLCSRTWDFGP
YFDALDAHPKLGVCLDTCHIFAAGHDLTGPSGMKQTLDLLVDTVGEGRLKLVHANDSKDV
VGAHKDRHENIGTGHIGEEPFRELMLHPATANVPLIIETPGGKEGHAADVARLKELRSV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaacaagtcccccagcaccgtgtcccgcggcaccttgtcccgcaatcccgtc
ggcggccacgtccccgtcgccggcggcctggcatccgtagggctttcgtacgcccgggag
ctgggtgccgaggccgtccaggtcttcgtggccaacccgcgcggctgggcgaccccgccc
ggcaatccgaagcaggacgaggagttccgcgcggcctgcgccgccgagaacatcccggcg
tacgtccacgcgccctacctcatcaacttcggctcgcacaccgaggcgaccgcggagaag
tccgtggagtccctgcgccactcgctgcgccgggcccgcgagatcggcgcgctcggcgtg
gtcgtgcacaccggctcggcgaccggcggccgggaccgcgccgtcgcgctgaagcaggtg
cgcgaccggatgctgccgctgctcgacgagctgacgcacgacgacgacccctacctcctc
ctggagtcgaccgcgggccaggggttctcgctctgctcacgcacctgggacttcggcccg
tacttcgacgccctcgacgcccacccgaagctgggcgtctgcctggacacctgccacatc
ttcgcggcgggccacgacctgaccgggccgagcggcatgaagcagacgctggacctcctg
gtcgacaccgtcggcgagggccgcctgaagctggtgcacgccaacgactccaaggacgtg
gtcggcgcgcacaaggaccgccacgagaacatcggcaccggccacatcggcgaggagccc
ttccgcgagctcatgctccaccccgcgaccgcgaacgtaccgctgatcatcgagacgccc
ggcggcaaggaaggccacgcggcggacgtggcgcggctgaaggagctcaggagcgtctag
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