Streptomyces durmitorensis: M4V62_30795
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Entry
M4V62_30795 CDS
T08503
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sdur
Streptomyces durmitorensis
Pathway
sdur03030
DNA replication
sdur03430
Mismatch repair
sdur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M4V62_30795 (dnaE)
03430 Mismatch repair
M4V62_30795 (dnaE)
03440 Homologous recombination
M4V62_30795 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdur03032
]
M4V62_30795 (dnaE)
03400 DNA repair and recombination proteins [BR:
sdur03400
]
M4V62_30795 (dnaE)
Enzymes [BR:
sdur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M4V62_30795 (dnaE)
DNA replication proteins [BR:
sdur03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M4V62_30795 (dnaE)
DNA repair and recombination proteins [BR:
sdur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M4V62_30795 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
UQT59097
LinkDB
All DBs
Position
6908847..6912389
Genome browser
AA seq
1180 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHVAMSDHGNLHGAYDFFHSAQKA
GVTPIIGIEAYVAPESRRDKRKIKWGQPHQKRDDVSGSGGYTHKTIWAANSTGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGELQTRLRLGQFDEAVKAAAEYQD
IFGKDRYFLELMDHGIDIERRVRDDLLRVGKKLGIPPLVTNDSHYTYAHESVAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCRNTLLVAEQIDTTGMFEKRD
LMPKFEIPEGFTEVTWFQEEVRVGMNRRYPGGVPEDRQKQAEYEMDIIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPITHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLSGITDPKHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVRN
DKGIDLEMLSLPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHINYAERKNGRQEITPIHPELEEPLKETLGLTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFVLFQEGAKKNGFSDAAIQALWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
VHNFAAQGDDVILFGLEAVRNVGTNVVDSIIRSRKAKGKFASFPDYLDKVEAAACNKRTT
ESLIKAGAFDTMGHTRKGLTAQYEPMIDNVVQVKRKEAEGQFDLFGAMGDEGAGDEPGFG
LDVEFSTDEWEKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIGQLTGGDYSDGSI
VTIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGR
LDKREDVPRLVAMEMQVPDLSNAGTNAPVLITIPTVRVTPPMVSRLGEILSHHRGNSEVR
IKLQGAQKTTVLRLDRHRVQPDAALFGDLKVLLGASCLAG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgccctttacgcacctccacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcaatgcctgtaatgagatgggcatgacgcatgtcgcc
atgtccgaccacggcaacctgcacggggcgtacgacttcttccactcggcgcagaaggcg
ggcgtcacgccgatcatcggcatcgaggcgtatgtggccccggagtcccgccgcgacaag
cggaagatcaagtggggccagccgcatcagaagcgtgacgacgtgtccggttcgggtggt
tacacccacaagacgatctgggcggcgaacagcaccggcctgcacaacctcttccggctc
tcctcggacgcgtatgccgagggctggctccagaagtggccgcgcatggacaaggagacg
atctcccagtggtcggagggactgatcgcctccaccggctgcccttcaggagagctccag
acccgcttgcgcctgggccagttcgacgaggcggtgaaggctgccgccgagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgacatcgagcgc
cgggtccgcgacgacctgctccgggtcggcaagaagctcggcatcccgcccctggtgacg
aacgactcgcactacacgtacgcgcacgagtccgtcgcccacgacgccctgctctgcatc
cagaccggcaagaacctctcggacccggaccgcttccgcttcgacggcaccggctattac
ctcaagtcgaccgacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
cgcaacacgctcctggtggccgagcagatcgacaccacggggatgttcgagaagcgcgac
ctcatgccgaagttcgagatcccggagggcttcaccgaggtcacctggttccaggaggag
gtccgggtcggcatgaaccgccgctacccgggcggtgtccccgaggaccggcagaagcag
gccgagtacgagatggacatcatcatccagatggggttcccggggtacttcctcgtggtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtgggtccgggccgtggctcc
gcggcaggatcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgatcacgcac
gggctgatcttcgagcggttcctcaaccccgagcgtgtctccatgcccgatgtcgacatc
gacttcgacgagcgcaggcgcgtcgaagtgatccggtacgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacgtacggaaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctcggatatccgtacgcgatgggcgaccgcctcaccaaggcgatgccc
gccgacgtcctgggcaagggcatcgacctctccggcatcaccgaccccaagcacccgcgc
tacagcgaggcgggcgagatccgggggatgtacgagaacgaaccggacgtgaagaaggtc
atcgacaccgccaagggtgtggagggcctggtccggcagatgggcgtgcacgcggccggc
gtcatcatgtccagcgagccgatcgtggaccacgcgccgatctgggtgcggcacacggac
ggcgtgacgatcacgcagtgggactacccccagtgcgagtcgctcggcctgctcaagatg
gacttcctgggtctgcgcaacctcaccatcatggacgacgccgtcaagatggtgcgcaac
gacaagggcatcgacctggagatgctctcgctcccgctcgacgaccccaagaccttcgaa
ctgctctgccgcggtgacacgctcggtgtcttccagttcgacggcggcccgatgcgttcg
ctgctgcgccagatgcagcccgacaacttcgaggacatttccgccgtctcggccctgtac
cggccgggcccgatgggcatgaactcgcacatcaactacgcggagcgcaagaacggccgc
caggagatcacgccgatccacccggagctcgaagagcccctgaaggagacgctcggcctg
acctacggcctcatcgtgtaccaggagcaggtgcagaaggccgcgcagatcatcgccggg
tactccctgggtgaagccgacatcctgcgccgcgtgatgggcaagaagaagcccgacgag
ctggcgaagaacttcgtcctcttccaggagggagcgaagaagaacggcttctcggacgcc
gcgatccaggccctgtgggacgtcctggtgcccttcgccggatacgcgttcaacaaggcg
cactcctcggcgtacggcctggtcacgtactggaccgcctacctcaaggcgaactacccc
gccgagtacatggcggcgctgctcacctcggtgaaggacgacaaggacaagtcggccgtc
tatctgaacgagtgccggcgcatgggcatcaaggtcctgccgcccaacgtgaacgagtcc
gtgcacaacttcgccgcgcagggcgacgacgtgatcctcttcggcctggaggcggtccgc
aacgtcggtacgaacgtggtggattcgatcatccggtcgcgcaaggcgaaggggaagttc
gcctccttccccgactacctcgacaaggtcgaggccgccgcctgcaacaagcggaccacg
gagtcgctgatcaaggcgggcgccttcgacaccatggggcacacccgcaagggcctgacc
gcgcagtacgagccgatgatcgacaacgtcgtgcaggtcaagcgcaaggaagcggaaggg
cagttcgacctcttcggggcgatgggcgacgagggcgccggggacgagccgggcttcggg
ctcgacgtcgagttctccaccgacgagtgggagaagacgtatctcctcgcccaggagcgg
gagatgctcggtctgtacgtctccgaccaccccctgttcggcctggagcacgtcctgtcc
gacaaggccgacgcgggcatcgggcaactcaccggcggtgactactcggacggctcgatc
gtcaccatcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcc
tgggccatcgccaccgtcgaggacctcgcgggttccatcgagtgcatgttcttcccggcg
acctatcagctggtgtccacccaactggtcgaggacgccgtggtgttcgtcaagggacgc
ctcgacaagcgtgaggacgtgccgcgcctcgtcgcgatggagatgcaggtccccgacctg
tcgaacgcgggcaccaacgcgcccgtcctcatcaccatcccgacggtgcgggtgaccccg
ccgatggtcagccgcctcggcgagatcctcagccaccaccggggcaacagcgaggtccgg
atcaagctccagggggcgcagaagaccacggtgctgcggctcgaccgccaccgggtgcag
ccggacgcggcgctcttcggcgatctgaaggtgctgctcggcgcgtcctgtctggccggg
tag
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