Streptomyces durmitorensis: M4V62_37360
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Entry
M4V62_37360 CDS
T08503
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sdur
Streptomyces durmitorensis
Pathway
sdur00040
Pentose and glucuronate interconversions
sdur01100
Metabolic pathways
sdur02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdur00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
M4V62_37360
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M4V62_37360
Enzymes [BR:
sdur01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
M4V62_37360
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
UQT60280
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Position
complement(8339869..8341167)
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AA seq
432 aa
AA seq
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MTTTRTRRGAVRRSLTLLAGCTALVVAVTSAPASAAGARDVLPPRDGWASADGGTTGGAG
ADRAHTYTVTTWGQLRAALADDPGAPRVIKVKGTLNATAAGCAAFEADGYDFDRYLADYD
PAVWGRDTPVSGAQEDLRAASAARQGAAIKAYVPADTTIVGVGRNAGITGGSLQIQGVDN
VVVRDLTLESPLDCFPQWDPTDGATGAWNSEYDSMVVHGSTHVWVDHNTFTDGAHPDSSL
PSYYGEIYQQHDGELDVVRGADLVTASWNVFADHDKTLMIGNSDSAGATDRGKLRVTLHH
NVFRDIVERAPRVRFGQVDAYNNHYIVPAGGYQYSFGIGQESRLVAQKNAFTLPDGVSAA
KILKKWKEAPVTADANYVNGRRVDLIAVHNAELPEETLASGAGWTPSLRTRVDDPRKLPG
LLAHQAGAGKRR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacaagaacgaggcgcggggctgtccgccgatctctcaccctgctcgcgggg
tgcaccgccctggtcgtggccgtcacgagcgccccggcctcggccgccggcgcccgcgac
gtgctgccgccccgcgacggctgggcgtccgccgacggcgggaccacgggcggcgccggt
gccgaccgagcgcacacctacacggtcaccacctgggggcagctgcgggccgcgctcgcc
gacgaccccggggctccccgtgtcatcaaggtcaaggggacgctgaacgcgacggccgcg
ggctgcgccgcgttcgaggccgatggctacgacttcgaccggtacctcgccgactacgac
cccgccgtgtggggccgtgacactccggtgagcggcgcgcaggaggacctgcgggcggca
tcggcggcccggcagggcgcggccatcaaggcgtacgtcccggccgacacgaccatcgtg
ggcgtcgggaggaacgccgggatcacgggcggcagcctgcagatccagggcgtggacaac
gtggtcgtccgcgatctcacgctggagagccccttggactgcttcccgcagtgggatccc
acggacggcgccaccggggcctggaactccgagtacgacagcatggtcgtccacggctcg
acgcatgtgtgggtcgaccacaacacgttcaccgacggcgcgcaccccgacagttcgctg
ccgtcctactacggcgagatctaccagcagcacgacggcgagctggacgtcgtgcgcggc
gccgacctcgtcaccgcctcctggaacgtcttcgccgaccacgacaagaccctgatgatc
ggcaacagcgacagcgcgggcgccacggaccgcggcaagctgcgggtcaccctgcaccac
aacgtgttccgggacatcgtcgagcgggcgccgcgcgtccgcttcgggcaggtcgacgcc
tacaacaaccactacatcgtccccgcgggcggctatcagtactcgttcggcatcggccag
gagtcccgactggtcgcccagaagaacgcgttcacgcttccggacggggtcagcgccgcg
aagatcctcaagaagtggaaggaggcgccggtcaccgccgacgccaactacgtcaacggc
aggcgcgtcgatctcatcgccgtccacaacgcggagctgcccgaggagaccctcgcgtcg
ggtgcgggctggacgccgagcctccggacgcgggtggacgacccgcgcaagctgcccggc
ctgctcgcgcatcaggcgggcgcgggcaagcgccgctga
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