Streptomyces durmitorensis: M4V62_41460
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Entry
M4V62_41460 CDS
T08503
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sdur
Streptomyces durmitorensis
Brite
KEGG Orthology (KO) [BR:
sdur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdur03016
]
M4V62_41460 (thpR)
Enzymes [BR:
sdur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
M4V62_41460 (thpR)
Transfer RNA biogenesis [BR:
sdur03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
M4V62_41460 (thpR)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UQT61026
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All DBs
Position
complement(9370453..9371031)
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AA seq
192 aa
AA seq
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MNEQIQPATVRVFIALAPPDDAKQELARVLEPAYRTHPRMRWNRIEDWHITLAFLGEVPA
SAVPLLRTPLARIAAARSPLTLALRGGGHFDERVLWSGIDGDLDALHLLATEVRAVVDDC
GIARANRPFRPHLTLARARRDTPSCAVEAAAGLAEFSGRTWQAARLHLVASNIGRGPGPI
HYRDVGAWDFEA
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaacagattcagcccgcgaccgttcgtgtcttcatcgctctcgccccgcccgac
gacgcgaagcaggaactggcccgggtactcgaacccgcctaccgcacgcatccaaggatg
cggtggaaccgcatcgaggactggcacatcaccctggcgttcctcggtgaggtccccgca
tcggcggttcccctcctgcgtacgccgctcgcgcgcatcgcggccgcccgcagccccctc
accctggcgctgcgcggtggcgggcacttcgacgagcgtgtgctgtggagcgggatcgac
ggcgacctcgacgcgttgcatctgctcgccaccgaggtgcgtgccgtggtcgacgactgt
ggcatcgctcgcgcgaaccggccgttccggccgcatctgacgctggcccgcgcccgccgg
gacactccgtcgtgcgcggtggaagccgccgccgggctcgccgagttcagcggccgcacc
tggcaggccgcgcggctgcacctggtcgccagcaacatcggccgcggacctggacccatc
cactaccgcgatgtcggcgcctgggacttcgaggcctag
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