KEGG   Streptomyces durmitorensis: M4V62_42605
Entry
M4V62_42605       CDS       T08503                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
sdur  Streptomyces durmitorensis
Pathway
sdur03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sdur00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    M4V62_42605 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdur03400]
    M4V62_42605 (uvrA)
DNA repair and recombination proteins [BR:sdur03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     M4V62_42605 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      M4V62_42605 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind ABC_tran AAA_21 AAA_16 DnaJ_CXXCXGXG AAA_29 Anti-TRAP AAA_22 nSTAND1 AAA_25 AAA_33 DUF4350 NACHT cobW Viral_helicase1 DUF5351 MeaB DUF463 NTPase_1
Other DBs
NCBI-ProteinID: UQT61232
LinkDB
Position
complement(9609508..9611976)
AA seq 822 aa
MNKDASDPFVHVRGASENNLRNIDVDVPRDAMVAFTGVSGSGKTSLAFGTLYAEAQRRYF
ESVAPYARRLLHQVAAPHVQDITGLPPAVALQQRRGAPSSRSTVGTITTLSNLLRMLYSR
AGTYPPRAARLEAESFSPNTAAGACPECHGLGVVHDVAEDLLVPDPSLSIREGAIAAWPG
AWQGANLRSVVSGLGIDIDRPWRRLRKKDRDWLLYTDEQPSVYIEPEEGRVDYGYQGKFW
SARKHVMHVLADSKSEKMRERTLRFVRSVPCPECHGSGLRPEGLAVTFAGHSIAEINAMP
LTEVAALLRPVAGRSKADATTSTARSGETTEVAVRICGDLVARVDVLLDLGLGYLGLGRR
STTLSPGEAQRLRIATQLRSGLFGVVYVLDEPSAGLHPADAEPLLDVLDRLKAAGNSLFV
VEHDMDVVRRADWVVDIGPGAGEGGGRVLYSGPVAGLEQVRESATSQHLFGRAKPLDHRP
RTPHGWLHLSGVSRHNLHDVSVDVPLCVLTAVTGVSGSGKSTLVTQVLAEVVRSHLGLVP
EEPDEAQLEVDVQDASGIESFDRLVRVDQRPIGRTPRSNLATYTGMFDAVRKLYAATDEA
RARGYSAGRFSFNVPQGRCETCQGEGFVAVELLFLPGTYAPCPTCRGARYNAETLEVTYR
GKNIAEVLALSVDAAATFLSAVPAASRSLETLREVGLGYLRLGQPATELSGGEGQRIKLA
TELQRARRGHALYLLDEPTAGLHPSDIALLLRQLHRLVDAGNTVVLVEHDLDTIVTADWV
IDLGPGGGDAGGRVIAAGPPAKVARARRSATAPHLAARLAGS
NT seq 2469 nt   +upstreamnt  +downstreamnt
gtgaacaaggacgcgagcgaccccttcgtgcatgtccggggcgccagtgagaacaacctg
cggaacatcgatgtcgacgttccgcgggacgcgatggtcgccttcaccggcgtctccggt
tcgggcaagacctcgctcgcgttcggcacgctctacgcggaggcccagcggcgctacttc
gagtccgtagcaccatacgcccgaaggctgctgcaccaggtcgcagcgccgcacgtgcag
gacatcaccggattgccacccgccgtggccctgcagcagcgacgcggggcgcccagttcg
cgctcgacggtcggcaccatcaccacgctgtccaatctgctgcgcatgctgtactcccgc
gccggcacctatccgccccgggccgcacggctggaagccgagtcgttctcacccaacacc
gcggccggcgcctgcccggagtgccacggactgggcgtcgtgcacgacgtcgccgaggac
ctgctcgtcccggacccctcgctgagcatccgcgagggggcgatcgccgcctggccgggc
gcctggcagggcgccaacctgcgcagcgtcgtgagcggcctggggatcgacatcgaccga
ccgtggcgcaggctcaggaagaaggaccgggactggctgctgtacacggacgaacagccc
tccgtgtacatcgagccggaggagggccgcgtcgactacggctaccaaggcaagttctgg
agcgcccgcaagcacgtcatgcacgtcctcgccgactcaaagagcgagaagatgcgcgaa
cggacactccggttcgtcaggagtgtgccctgccccgagtgtcacggcagcggactgcga
cccgagggactcgccgtgaccttcgccggacattccatcgccgagatcaacgcgatgccg
ctcaccgaagtcgcggcactgctgcggcccgtcgcggggcggtccaaggccgacgccacc
acgtcgaccgcccgatccggggagacgaccgaggtcgcggtccggatctgcggtgacctg
gtcgcacgggtcgacgtactgctcgacctgggcctcgggtatctcggcctcgggcgccgc
tcgacaaccctgtcgcccggcgaggcgcagcgcctgcggatcgccacccagctgcgctcg
gggctgttcggcgtcgtctacgtcctcgacgaaccctccgcaggcctgcacccggctgac
gcggaaccgctgctggacgtgctggaccgcctcaaggcggcgggcaactcgctgttcgtc
gtggagcacgacatggacgtcgtacggcgggcggactgggtggtcgacatcggccccggc
gcgggcgagggcggtgggcgcgtgctgtacagcggcccggtcgccggtcttgagcaggtg
agggagtcggccacgagccagcacctgttcgggcgcgccaagccgctcgatcaccgccca
cgcacaccgcacggctggctgcacctgagcggcgtctcccgccacaatctgcacgacgtc
tccgtcgacgtaccgctctgcgtactgaccgcggtaacaggcgtgtccggctccggaaaa
tcgacactggtgacgcaggtcctcgccgaggtcgtccgcagccacctcggactcgtaccc
gaggagcccgacgaggcgcagctggaggtcgacgtccaggacgcgtcgggcatcgagtcg
ttcgaccggctggtccgggtcgaccaacggcccatcggccgaactccccggtccaacctg
gccacgtacacggggatgttcgacgcggtgcgcaagctgtacgcggcgacggacgaggcc
agggcgcgcggctactcggccggacggttctccttcaacgtgccccaagggcggtgcgag
acctgccagggcgaaggattcgtcgcggtggaactgctgttcctgcccggcacctacgcg
ccgtgcccgacctgccggggcgcccggtacaacgccgaaacgctggaagtcacctaccgc
ggcaagaacatcgcggaagtgctggcgctgtccgtcgacgccgccgccacgttcctgtct
gccgtcccggccgcctcccgcagtctggagacgttgcgcgaggtgggactggggtacctg
cgactgggccagcccgcgacggaactcagcggtggtgaggggcaacgcatcaagctggcc
accgaactgcagcgagcccgccgcggccacgcgctctacctgctcgacgagccgacggcg
gggctgcacccctcggacatcgcgctgctgctgcgacagctgcaccggctcgtcgacgcg
ggcaacacggtcgtcctcgtcgagcacgacctggacacgatcgttaccgccgactgggtc
atcgacctcgggccgggcggcggcgacgcgggcgggcgggtgatcgcggcgggcccaccg
gccaaggtggcaagggcccgccgcagcgccaccgcgccccatctcgcggccaggctcgcg
ggctcctga

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