Streptomyces davaonensis: BN159_1916
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Entry
BN159_1916 CDS
T02518
Symbol
sigF1
Name
(GenBank) RNA polymerase sigma-F factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sdv
Streptomyces davaonensis
Brite
KEGG Orthology (KO) [BR:
sdv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdv03021
]
BN159_1916 (sigF1)
Transcription machinery [BR:
sdv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN159_1916 (sigF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DUF7343
HTH_23
HTH_24
MarR_2
GerE
HTH_Crp_2
HTH_28
MarR
HTH_3
DUF7342
YdaS_toxin
HTH_31
Motif
Other DBs
NCBI-ProteinID:
CCK26295
UniProt:
K4QZK9
LinkDB
All DBs
Position
complement(2116832..2117623)
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AA seq
263 aa
AA seq
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MPTRVSTKHHPHDDAPDTAQAFRDLAELPAGPRRDTLRDEIVEAWLPMADRLAGRFRSRG
ESFEDLRQVAALGLVKAVDRYDPERGNAFESYAVPTITGEIKRHFRDHMWTLHVPRRVQD
LRNRVRFAVQDLQTVSGHRPTAAEIAEHADMSEADVKVGLEALESFTALSLDAELPGSDD
GYSLSDALGSMDPALDTVVDREAVKPRIAALPERERAILYMRFFGDMTQSRIAEELGISQ
MHVSRLISRCCGRVREQVLRDVA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcccacacgagtgagcacgaagcaccacccgcacgacgacgcccccgacaccgcgcag
gcgttccgcgatctcgccgaactgcccgccgggccccggcgcgacacccttcgcgacgag
atagtcgaggcctggctgcccatggcggaccggctcgcgggccggttccgcagccgaggc
gagagtttcgaggatctgcggcaggtggccgccctcggactggtcaaggccgtcgaccgg
tacgacccggagcgcggcaacgccttcgagagctacgccgtgccgaccatcaccggcgag
atcaagcggcacttccgggaccacatgtggacgctgcatgtgccgcgccgggtgcaggat
ctgcgtaatcgcgtgcggttcgccgtgcaggacctccagaccgtctccgggcaccggccc
acggccgcggagatcgccgagcacgcggacatgagtgaggccgacgtcaaggtcggtctg
gaggcgctggagagtttcacggcgctgtccctggacgcggagctgcccggcagtgacgac
gggtactccttgagcgacgcgctcggttccatggatccggcgctggacacggtggtggac
cgggaggccgtcaagccacggatcgccgcgctgcccgagcgggagcgggcgatcctgtac
atgcggttcttcggggacatgacgcagagtcggatcgccgaggagctggggatctcgcag
atgcacgtgtcccggctgatcagccgctgctgcgggcgggttcgggagcaggtgctgcgg
gacgtggcgtag
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