Streptomyces davaonensis: BN159_2169
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Entry
BN159_2169 CDS
T02518
Symbol
alkA3
Name
(GenBank) putative bifunctional transcriptional activator/DNA repair enzyme AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sdv
Streptomyces davaonensis
Pathway
sdv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN159_2169 (alkA3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdv03000
]
BN159_2169 (alkA3)
03400 DNA repair and recombination proteins [BR:
sdv03400
]
BN159_2169 (alkA3)
Enzymes [BR:
sdv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BN159_2169 (alkA3)
Transcription factors [BR:
sdv03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BN159_2169 (alkA3)
DNA repair and recombination proteins [BR:
sdv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN159_2169 (alkA3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Treh_trans_TtfA
Motif
Other DBs
NCBI-ProteinID:
CCK26548
UniProt:
K4QZM8
LinkDB
All DBs
Position
complement(2434389..2435771)
Genome browser
AA seq
460 aa
AA seq
DB search
MDEDTRYEAVRSRDARFDGEFFFAVETTGIYCRPSCPAVTPKRRNVRFFATAAAAQGSGF
RACRRCRPDAAPGSAEWNVRADVVGRAMRLIGDGVVDREGVAGLAGRLGYSPRQVQRQLT
GELGAGPVALARAQRAHTARVLLQTTDLPITEIAFAAGFASVRQFNDTIRTVYARTPSEL
RRTAARASRRPATPTAGIPLRLAHRGPYRSGAVFDLLQAEAVPGVEDVSGTPGRRTYRRT
LRLPHGTGIVALDERPGGTGHGTHPGGWLDAHLHLTDPRDLTTAVQRLRRLFDLDADPYA
IDERLGADARLAPLVAARPGLRSPGAADPEELAVRALVGPAGAERLVRAYGKALDAPCGN
LTHLFPEPAVLAEAEPHGTLGALTAALADGAVRLDAGADRDDTEAALLALPGLDPRTVAV
VRTRALGDPDVAPPGVDVPDSWRPWRSYAVQHLCAAGELE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagacaccaggtacgaggcggtgcgcagccgggatgcgcggttcgacggcgag
ttcttcttcgccgtcgagaccaccggcatctactgccgcccgagctgccccgccgtcacc
cccaagcgccgtaacgtccgcttcttcgcgaccgccgccgccgcgcagggctcgggtttc
cgggcctgccggcggtgtcgcccggacgccgcgcccggctcggccgagtggaacgtccgc
gcggacgtcgtgggccgggccatgcggctgatcggcgacggcgtcgtcgaccgcgagggc
gtggccggtctcgccggacggctcggctacagcccccgccaggtacagcgccagctgacc
ggcgagctgggcgccggacccgtcgcgctggcccgcgcccagcgcgcccacaccgcgcgc
gtcctgctccagaccaccgacctgccgatcaccgagatcgcgttcgccgccggattcgcc
agcgtcagacagttcaacgacaccatccggaccgtctacgcccgcacccccagcgagctg
cgccggaccgccgcccgagcctcccgccgacccgccaccccgaccgccggcatcccgctg
cggctcgcccaccgcggcccctaccgctccggcgccgtcttcgacctgctccaggccgaa
gcggtacccggcgtggaggacgtcagcggcaccccgggccgccgcacctaccgccgcacc
ctgcgcctgccgcacggcaccggcatcgtcgccctggacgaacgccccgggggcaccggc
cacggcacccaccccggcggctggctcgacgcccacctccacctcaccgacccccgcgac
ctcaccaccgccgtccagcgcctgcgccgcctgttcgacctggacgccgacccctacgcc
atcgacgagcggctcggcgccgacgcccggctcgccccgctggtcgccgcccgccccgga
ctccgctcacccggcgccgccgaccccgaggaactcgccgtacgggcgctggtagggccg
gccggtgccgagcggctggtgcgggcctacgggaaggcgctggacgcgccctgcggcaac
ctcacccacctcttcccggaacccgccgtcctcgccgaggccgagccgcacggcaccctg
ggcgcgctcaccgccgccctcgccgacggcgccgtacgcctggacgcgggtgccgaccgg
gacgacaccgaggcggcactgctcgccctgcccggcctcgacccccgtaccgtcgccgtc
gtgcgcacccgcgccctcggcgacccggacgtcgccccgcccggggtcgacgtccccgac
agctggcgcccctggcgctcgtacgccgtacaacacctgtgcgcagcaggggagttggag
taa
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