Streptomyces davaonensis: BN159_2655
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Entry
BN159_2655 CDS
T02518
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sdv
Streptomyces davaonensis
Pathway
sdv00300
Lysine biosynthesis
sdv00470
D-Amino acid metabolism
sdv01100
Metabolic pathways
sdv01110
Biosynthesis of secondary metabolites
sdv01120
Microbial metabolism in diverse environments
sdv01230
Biosynthesis of amino acids
Module
sdv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sdv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BN159_2655 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN159_2655 (dapF)
Enzymes [BR:
sdv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
BN159_2655 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
CCK27034
UniProt:
K4R2Y4
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Position
complement(3012905..3013774)
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AA seq
289 aa
AA seq
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MSTRIAFLKGHGTENDFVIVPDPENAIDLPPSAVAALCDRRAGIGGDGLLHVVRSAAHPE
AKDMAAEAEWFMDYRNGDGSIAEMCGNGVRVFARYLQRAGHATEGDLAIATRGGVKRVHL
AKNGDVTVGMGKARLPEGDVTVSVGERSWPARNVNMGNPHAVAFVADLAHAGNLYEPPPF
SPASAYPDGVNVEFVVDRGPRHVALRVHERGAGETRSCGTGACAVAVATARRDGADPAVT
GTPSTYTVDVPGGTLVITELPDGEIEMTGPAVIVAEGEFDATWLTTLAG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcggatcgccttcctcaagggtcacggcaccgagaacgacttcgtgatcgtc
ccggaccccgagaacgccatcgacctgcccccgtccgctgtcgccgcgctgtgcgaccgg
cgcgcgggcatcggcggggacggactgctgcacgtcgtgcggtccgccgcgcaccccgag
gccaaggacatggcggccgaggcggagtggttcatggattaccgcaacggcgacggctcg
atcgcggagatgtgcggcaacggcgtccgcgtcttcgcccgctacctccagcgcgcggga
cacgccaccgagggagacctcgcgatcgccacgcgcgggggcgtcaagcgcgtgcacctc
gccaagaacggcgacgtcaccgtcggcatgggcaaggcgcgcctgcccgagggcgacgtc
acggtgagcgtcggcgagcgaagctggcccgcgcggaacgtgaacatgggcaatccgcac
gcggtggccttcgtggcggacctcgcacacgccgggaacctgtacgagccgccgccgttc
agcccggcctcggcctacccggacggtgtgaacgtcgagttcgtcgtcgaccgcgggccc
cggcacgtcgccctgcgcgtgcacgagcgcggcgcgggggagacccgctcctgcggcacg
ggcgcgtgcgccgtcgccgtcgccacggcccgccgcgacggcgccgacccggcggtcacc
ggcactccgtcgacgtacaccgtcgacgtccccggcggcaccctggtgatcaccgagctc
cccgacggcgagatcgagatgaccggccccgcggtgatcgtcgccgagggcgagttcgac
gcgacctggctgacgaccctcgcgggctga
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