Streptomyces davaonensis: BN159_2695
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Entry
BN159_2695 CDS
T02518
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sdv
Streptomyces davaonensis
Brite
KEGG Orthology (KO) [BR:
sdv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdv03009
]
BN159_2695 (rimO)
Enzymes [BR:
sdv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BN159_2695 (rimO)
Ribosome biogenesis [BR:
sdv03009
]
Prokaryotic type
ribosomal protein modification factors
BN159_2695 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
CCK27074
UniProt:
K4R321
LinkDB
All DBs
Position
complement(3051086..3052555)
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AA seq
489 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWDLVEDASDADVAVVNTCGFVDAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELADALPEADGVLGFDDYADISDRLSTIL
SGGVHASHTPRDRRKLLPISPAERQESAAEVALPGHAPVDLPDGLAPASGPRAPMRRRLD
GAPVASVKLASGCDRRCTFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTGTPKIAPYFDLSF
QHSAPAVLRAMRRFGDTDRFLELLDTIRSKAPQAGVRSNFIVGFPGESEADLAELERFLN
HARLDAIGVFGYSDEEGTEAATYEDKLDPDVVADRLARVSRLAEQLVSQRAEERLGETVQ
VLVESVDEEGVYGRGVHQAPETDGQVLLTSGQGLSVGRIVEAKVVGTEGVDLVAEPLHGS
LVSGEEGAR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactcgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggaggcggacggctgggacctcgtggaggatgcctcc
gacgcggatgtcgccgtcgtcaacacctgtggcttcgtcgacgccgccaagaaggactcc
gtggacgccctcctggaggccaatgacctcaaggggcacggcagaacccaggccgtcgtg
gcggtgggctgcatggccgagcggtacggcaaggaactggcggacgcgctgccggaggcc
gacggcgtgctcggcttcgacgactacgcggacatctccgaccgcctctcgaccatcctg
agcggcggcgtccacgcctcgcacaccccgcgcgaccgacgcaagctgctgccgatcagc
ccggccgagcgccaggagtccgccgccgaggtcgccctgcccgggcacgccccggtcgac
ctcccggacggcctcgcacccgcctccggcccccgcgcgccgatgcgccgacggctcgac
ggcgcgcccgtcgcctcggtgaagctcgcctccggctgcgaccggcgctgcaccttctgc
gccatcccctccttccgcggctccttcatctcgcgccgcccgagcgacgtgctgaacgag
acgcgctggctggccgagcagggcgtcaaggagatcatgctggtctccgagaacaacacc
tcctacggcaaggacctcggcgacatccgcctgctggagtcgctgctgcccgagctggcc
gaggtcgacggcatcgagcgggtacgcgtcagctacctccagccggccgagatgcgcccc
gggctgatcgacgtcctcaccggcacgcccaagatcgcgccctacttcgacctctccttc
cagcactccgcgcccgccgtgctgcgggcgatgcgccgcttcggcgacaccgaccgcttc
ctggagctgctcgacaccatccggagcaaggccccccaggcgggcgtgcgctccaacttc
atcgtgggcttccccggcgagtccgaggcggacctggccgagctggagcgcttcctcaac
cacgcgcgcctggacgccatcggcgtcttcggctactccgacgaggagggcaccgaagcg
gcgacgtacgaggacaagctcgacccggacgtcgtcgccgaccggctcgcacgggtctcc
cggctggccgagcagctcgtctcgcagcgggccgaggagcgcctgggcgagaccgtccag
gtgctcgtcgagtccgtcgacgaggagggcgtgtacggccgtggcgtgcaccaggcgccg
gagacggacggccaggtgctgctcacgagcggccagggtctgagtgtcggccgtatcgtc
gaggcgaaggtggtcggcaccgagggtgtcgacctcgtggccgagccgctccacggctcg
ctcgtatccggtgaggagggggccagatga
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