Streptomyces davaonensis: BN159_2711
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Entry
BN159_2711 CDS
T02518
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sdv
Streptomyces davaonensis
Pathway
sdv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN159_2711 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdv03019
]
BN159_2711 (pnp)
03016 Transfer RNA biogenesis [BR:
sdv03016
]
BN159_2711 (pnp)
Enzymes [BR:
sdv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BN159_2711 (pnp)
Messenger RNA biogenesis [BR:
sdv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BN159_2711 (pnp)
Transfer RNA biogenesis [BR:
sdv03016
]
Prokaryotic type
tRNA degradation factors
BN159_2711 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
DUF2017
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
CCK27090
UniProt:
K4R1W3
LinkDB
All DBs
Position
complement(3081216..3083435)
Genome browser
AA seq
739 aa
AA seq
DB search
MENETHYAEAVIDNGAFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKNPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQV
VATIMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALINGQWVAFPTHTELEDA
VFDMVVAGRTLEDGDVAIMMVEAEATDKTIKLVEGGAEAPTEEVVAAGLEAAKPFIKVLC
KAQADLAAKAAKPTGEFPIFLDYQDDVLEALAAAVKPELASALTIAGKQERESELDRVKA
LAAEKLLPEFEGREKEISAAYRSLTKTLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSAVFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALVPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIEGETHYVTLTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPSAEAARTTINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGKLSL
IPVIEGEEADADKKDDTDK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggcgccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggttccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcctccaagaaccccaaggaccag
ctcgacttcttcccgctgacggtggacgtcgaggagcggatgtacgccgccggcaagatc
cccggcagcttcttccgccgtgagggccggccgagcgaggacgcgatcctcacctgccgc
ctcatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccaggtc
gtcgccacgatcatggcgctcaaccccgaccacctgtacgacgtcgtggcgatcaacgcc
gcctccgcgtccacccagctggccggtctgcccttctccggcccgatcggcggcgtccgc
gtcgcgctgatcaacggccagtgggtcgccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggttgtcgcgggccgcaccctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgacaagaccatcaagctggtcgagggcggcgccgaggcgccg
accgaggaggtcgtcgccgccggtctggaagccgcgaagcccttcatcaaggtgctgtgc
aaggctcaggccgacctcgccgcgaaggccgccaagccgaccggcgagttcccgatcttc
ctcgactaccaggacgacgtcctggaggcgctggccgccgccgtcaagccggagctggcc
tccgcgctgacgatcgcgggcaagcaggagcgcgagtcggagctggaccgcgtcaaggcg
ctcgccgccgagaagctcctgccggagttcgagggccgcgagaaggagatctccgccgcg
taccgctcgctgaccaagaccctggtccgtgagcgcgtcatcaaggagaagaagcgcatc
gacggccgtggcgtgacggacatccgtacgctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctccgcggtgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctcgacacgctgtcgccggtcacgcgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggcgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggcgctctcgccgagcgcgccctggtcccggtcctgccg
acgcgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgagctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctgaaggcccccgtcgccggtatcgccatgggtctgatctcccaggagatcgagggcgag
acgcactacgtcaccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaaggagttcgtgaccgccctccagctcgacaccaagctggac
ggcatcccggcctccgtcctggccgccgcgctcaagcaggcccgtgacgcccgcctccac
atcctcgacgtgatgatggaagcgatcgacacgccggacgagatgtccccgaacgccccg
cggatcatcaccgtgaagatccccgtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgagatcaccatcgaggacgacggc
accatctacatcggtgccgccgacggcccgtccgccgaggccgcccgtacgaccatcaac
ggcatcgccaacccgacgatgcccgaggtcggcgagcgctacctgggcacggtcgtcaag
accacgaccttcggcgcgttcgtctccctgctgcccggcaaggacggtctgctgcacatc
tcgcagatccgcaagctggccggcggcaagcgtgtggagaacgtcgaggacgtcctcggc
gtgggccagaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctctccctg
atccccgtgatcgagggcgaagaggctgacgccgacaagaaggacgacaccgacaagtga
DBGET
integrated database retrieval system
