Streptomyces davaonensis: BN159_2788
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Entry
BN159_2788 CDS
T02518
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor whiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
sdv
Streptomyces davaonensis
Pathway
sdv02020
Two-component system
sdv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BN159_2788 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BN159_2788 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdv03021
]
BN159_2788 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sdv02035
]
BN159_2788 (whiG)
Transcription machinery [BR:
sdv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN159_2788 (whiG)
Bacterial motility proteins [BR:
sdv02035
]
Flagellar system
Flagellar assembly proteins
Stator
BN159_2788 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
CCK27167
UniProt:
K4R201
LinkDB
All DBs
Position
complement(3176815..3177657)
Genome browser
AA seq
280 aa
AA seq
DB search
MPQHTSGSDRAAIPPAARDGGNVRPPAPSTLDELWRSYKATGDERLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDIDREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYATLEARLRRTPSEGEVAAEMGIAVDELHSVFSQLSLANVVAL
EELLHVGGESGDGLSVMDTLEDTAADNPVEVAEDRELRRFLARAINTLPEREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgaccgggcggcgatccccccagccgcccgcgacggt
ggcaacgtgcggccgcccgctccctcgacgctcgacgagctgtggcggtcgtacaaggcg
acgggggacgagcggctgcgtgagcagctgatcctgcactactcgccgctcgtgaaatac
gtggccgggcgggtcagcgtcgggctgccgcccaacgtggagcaggccgacttcgtgtcc
tcgggggtgttcgggctgatcgacgcgatcgagaagttcgacatcgaccgggagatcaag
ttcgagacgtacgcgatcacccggatccggggcgcgatgatcgacgagctgagggcgctg
gactggattccgcggtcggtgcggcagaaggcgcggaacgtggagcgggcgtacgcgacg
ctggaggcgcggctgcggcggacgccgtcggagggggaggtggccgccgagatggggatc
gcggtggacgaactccactcggtcttcagccagttgtcgctggccaacgtggtggcgctg
gaggagttgctccatgtggggggtgagagcggcgacgggctgagcgtcatggacacattg
gaggacaccgccgcggacaaccccgtggaggtggccgaggaccgggaactgcggcggttt
ctggcgcgggcgatcaatacgctcccggagcgcgagaagaccgtggtgacgctgtactac
tacgaggggctcacgctggccgagatcgggaacgtgctgggggtgaccgagagccgggtg
agtcagatccacaccaagtcggtacttcagttgcgggcgaagctggcgagtttcggccgc
tga
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