Streptomyces davaonensis: BN159_3960 Help Entry BN159_3960        CDS       T02518                                  Symbol rtcB Name (GenBank) RNA-splicing ligase RtcB   KO K14415   tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] Organism sdv  Streptomyces davaonensis Brite KEGG Orthology (KO) [BR:sdv00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:sdv03016]     BN159_3960 (rtcB) Enzymes [BR:sdv01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase      BN159_3960 (rtcB) Transfer RNA biogenesis [BR:sdv03016]  Eukaryotic type   tRNA spricing factors    tRNA splicing ligase complex     BN159_3960 (rtcB)  Prokaryotic type    tRNA splicing ligases     BN159_3960 (rtcB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RtcB Motif Other DBs NCBI-ProteinID:  CCK28339 UniProt:  K4R6M5 LinkDB All DBs Position complement(4428043..4429236) Genome browser AA seq 397 aa AA seqDB search MSYVEMPGAKVPIRMWTDPTTVEDVALQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI AMQGAVCPAAVGVDIGCGMSAVKTSLTVNDLPGDLSRLRSKIEQAIPVGRGMHDDAVDPT RMHGFGTAGWDDFWGRFDGVADAVKFRQERATKQMGTLGSGNHFVEVCTDTDGAVWLMLH SGSRNIGKELADFHIGVAQKLPHNQGLVDRDLAVFIADTPQMAAYRNDLFWAQEYAKYNR SIMMALLKDVVRKEFRKAKPTFEPEISAHHNYVAEERYEGMDLLVTRKGAIRAGSGEYGI IPGSMGTGSYIVKGLGNPLAFNSASHGAGRRMSRNAAKKRFSTKDLEEQTRGVECRKDSG VVDEIPGAYKPIEQVIDQQRDLVEVVAKLKQVVCVKG NT seq 1194 nt NT seq  +upstreamnt  +downstreamnt atgtcgtacgtagagatgcccggtgcgaaggttccgatccggatgtggacggatccgacg acggtggaggacgtggccctccagcagctgcggaacgtggcgaccctgccgtggatcaag ggtctggcggtcatgccggacgtgcactacggcaagggcgcgacggtgggctccgtcatc gcgatgcagggtgcggtgtgcccggccgcggtgggcgtggacatcggctgcgggatgtcg gccgtcaagacgtccctgaccgtgaacgatctccccggtgacctgtcgcggctgcggtcg aagatcgagcaggcgattccggtggggcgcggcatgcatgacgacgccgtcgacccgacg cggatgcacggcttcggcacggccgggtgggacgacttctggggtcgcttcgacggggtc gcggacgcggtgaagttccggcaggagcgggccaccaagcagatggggaccctcggaagc ggaaaccacttcgtcgaggtgtgcaccgacaccgacggcgccgtctggctgatgctgcac tccgggtcccggaacatcggcaaggagctcgccgacttccacatcggcgtggcccagaag ctcccgcacaaccagggcctggtcgaccgcgacctcgccgtcttcatcgcggacaccccg cagatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgcgaagtacaaccgc tcgatcatgatggcgctcctgaaggacgtggtccgcaaggagttcaggaaggccaagccg actttcgagccggagatcagcgcgcaccacaactacgtggccgaggagcgctacgagggc atggacctgctcgtgacccgtaagggcgcgatccgggccggctccggcgagtacggcatc atcccgggctcgatgggcacgggctcgtacatcgtgaagggcctcggcaacccgctggcc ttcaactcggcctcgcacggcgcggggcggcggatgagccgtaacgcggcgaagaagcgg ttctcgacgaaggacctggaggagcagacgcggggcgtggagtgccgtaaggactccggt gtcgtggacgagatcccgggcgcctacaagccgatcgagcaggtcatcgatcagcagcgg gacctggtggaggtcgtggcgaagctgaagcaggtcgtctgcgtgaagggctga

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