Streptomyces davaonensis: BN159_4111
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Entry
BN159_4111 CDS
T02518
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sdv
Streptomyces davaonensis
Brite
KEGG Orthology (KO) [BR:
sdv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdv03032
]
BN159_4111 (topA)
03400 DNA repair and recombination proteins [BR:
sdv03400
]
BN159_4111 (topA)
Enzymes [BR:
sdv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BN159_4111 (topA)
DNA replication proteins [BR:
sdv03032
]
Prokaryotic type
DNA Topoisomerases
BN159_4111 (topA)
DNA repair and recombination proteins [BR:
sdv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN159_4111 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
CCK28490
UniProt:
K4R5Z7
LinkDB
All DBs
Position
complement(4600870..4603695)
Genome browser
AA seq
941 aa
AA seq
DB search
MSPTSETAKGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVEHDFEPIYVVNADKRAQVKKLKDLLKESDELYLATDEDREGEAIAWHLQEVL
KPKVPVKRMVFHEITKAAIQAAVANPRQLNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERDRIAFRSAEYWDLTGTFSTGRAGDPSDPSSLVARLQTVD
GRRVAQGRDFDSLGQLKSANTLHLDEANARALAAALEQTRFAVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGFITYMRTDSTTLSDTAVAAARAQVTQLYGA
DYLPSAPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTAADGRDVEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
SEGDALSAQEITVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQSVPWLKRFYFGEGE
GAGIGGAAEAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGNDIVLRVGRYGPYIERGE
KDSENHQRADIPTDLAPDELSVELAEELLAKPSGDFELGADPVSGNQIVAKDGRYGPYVT
EILPEGTPKTGKNAVKPRTASLFKSMSLDTVTLDDALKLMSLPRVVGADAEGQEITAQNG
RYGPYLKKGTDSRSLQTEDQLFTITLEEALEIYSQPKQRGRAAAKPPLKELGTDPVSEKP
VVVKDGRFGPYVTDGETNATLRSGDSVEDITPERGFELLAEKRAKGPAKKTAKKAPAKKT
AAKKAPAKKATAAKKTAAKKTTTAKKTTAKKATAAKPTAED
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcgaagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcaaagacgatcaagggctatctcggccccggatacgttgtcgaggcgagcgtc
gggcacattcgcgacctccccaacggtgccgcggaggtgccggagaagtacaccggtgag
gtccgccgcctcggtgtggacgtcgaacatgacttcgagccgatctatgtggtcaacgct
gacaagcgggcgcaggtcaagaagctcaaggacctgctgaaggagtcggacgagctctat
ctcgccaccgatgaggaccgcgagggcgaggccatcgcctggcacctccaggaggtgctc
aagcccaaggtcccggtcaagcggatggtcttccacgagatcaccaaggccgcgatccag
gccgccgtcgccaacccgcgtcagctcaaccagaagctggtcgacgcccaggagacccgc
cgcatcctcgaccgcctctatggctacgaggtctcgccggtgctgtggaagaaggtcatg
ccgcggctgtcggcgggccgggtccagtcggtcgcgacgcggctcgtggtggagcgggaa
cgcgaccgcatcgcgtttcgttcggctgagtactgggacctgacgggcaccttctcgacc
ggccgcgcgggggatccgtcggacccgtcgtcgctggtcgcccgcctccagaccgtcgac
ggcaggcgggtcgcgcagggtcgcgacttcgactccctgggacagctcaagagcgcgaac
acccttcacctcgacgaggcgaacgcccgcgcgctggccgccgccctggagcagacgcgg
ttcgccgtccgctcggtcgagtccaagccgtaccgccgctcgccgtacgcccccttccgt
acgacgaccctccagcaggaggccagccgcaagctcggcttcggcgcgaaggcgaccatg
caggtcgcgcagaagctgtacgagaacggcttcatcacctatatgcgtacggactccacg
acgctcagcgacaccgctgtcgccgcggcccgcgcgcaggtcacccagctgtacggcgcc
gactacctgccgtccgccccgcgcacctacgccgggaaggtcaagaacgcgcaggaggcg
cacgaggcgatccgcccgtcgggtgatcgtttccgcacgcccgccgagaccggtctgacc
ggcgaccagttcaagctctacgagctgatctggaagcgcaccgtcgcctcccagatgaag
gacgcgaccggcaacagcgtgaccgtcaagatcggcggcaccgccgccgacggccgggac
gtcgagttcagcgcctccggcaagacgatcaccttccacggcttcctgaaggcctacgtc
gagggcgccgacgacccgaacgccgaactggacgaccgcgagcgccggctgccccaggtc
agcgagggcgacgcgctcagcgcccaggagatcacggtcgacgggcacgccaccaagccc
ccggcccgctacaccgaggccagcctggtcaaggagctcgaagagcgcgagatcggccgc
ccgtcgacgtacgcctcgatcatcggcaccatcctcgaccgcggctatgtcttcaagaag
ggcacggccctcgtgccgtccttcctgtccttcgccgtggtcaacctcctggagaagcac
ttcgggcggctcgtcgactacgacttcaccgccaagatggaggacgacctcgaccgcatc
gcccgcggtgaggcgcagtccgtgccgtggctgaagcggttctacttcggcgagggtgag
ggcgcgggcatcggcggcgccgccgaggccggaaacggcgacggcgaccacctcggcggc
ctcaaggagctggtgaccgacctgggcgcgatcgacgcgcgcgaggtgtcctcgttcccg
gtgggcaacgacatcgtgctgcgggtcgggcgctacggcccgtacatcgagcgcggtgag
aaggactccgagaaccaccagcgcgcggacatcccgaccgacctggcgcccgacgagctc
tccgtggagctggccgaggaactgctcgccaagccgagcggcgacttcgagctgggcgcc
gacccggtgagcggcaaccagatcgtcgccaaggacggccgctacggcccgtacgtcacc
gagatcctgcccgagggcaccccgaagaccggcaagaacgccgtgaagccgcggaccgcc
tcgctgttcaagtcgatgtcgctggacacggtgacgctcgacgacgccctgaagctgatg
tcgctcccgcgcgtggtgggcgccgacgccgagggccaggagatcaccgcgcagaacggc
cgctacggcccgtatctgaagaagggcacggactcgcggtcgctccagaccgaggatcag
ctcttcacgatcaccctcgaagaggcgctggagatctactcccagcccaagcagcggggc
cgggccgccgccaagccgccgctgaaggagctgggcaccgacccggtcagcgagaagccg
gtcgtggtcaaggacggccgcttcggtccgtacgtcaccgacggggagaccaacgcgacc
ctgcgctccggcgacagcgtcgaggacatcaccccggagcgcggcttcgagctgctcgcc
gagaagcgcgccaagggacccgccaagaagacggcgaagaaggccccggcgaagaagacc
gccgccaagaaggctccggccaagaaggcgaccgccgcgaagaagacagcggcgaagaag
acgacgacggccaagaagacgaccgcgaagaaggcgacggcggccaagccgaccgcggag
gactga
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