Streptomyces davaonensis: BN159_4888
Help
Entry
BN159_4888 CDS
T02518
Symbol
groL2
Name
(GenBank) 60 kDa chaperonin 2
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sdv
Streptomyces davaonensis
Pathway
sdv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN159_4888 (groL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdv03019
]
BN159_4888 (groL2)
03110 Chaperones and folding catalysts [BR:
sdv03110
]
BN159_4888 (groL2)
03029 Mitochondrial biogenesis [BR:
sdv03029
]
BN159_4888 (groL2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdv04147
]
BN159_4888 (groL2)
Enzymes [BR:
sdv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BN159_4888 (groL2)
Messenger RNA biogenesis [BR:
sdv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BN159_4888 (groL2)
Chaperones and folding catalysts [BR:
sdv03110
]
Heat shock proteins
HSP60 / Chaperonin
BN159_4888 (groL2)
Mitochondrial biogenesis [BR:
sdv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BN159_4888 (groL2)
Exosome [BR:
sdv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BN159_4888 (groL2)
Exosomal proteins of other body fluids (saliva and urine)
BN159_4888 (groL2)
Exosomal proteins of breast cancer cells
BN159_4888 (groL2)
Exosomal proteins of colorectal cancer cells
BN159_4888 (groL2)
Exosomal proteins of bladder cancer cells
BN159_4888 (groL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4844
DUF5021
CbiA
Motif
Other DBs
NCBI-ProteinID:
CCK29267
UniProt:
K4R817
LinkDB
All DBs
Position
5431761..5433383
Genome browser
AA seq
540 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIE
KAVEAVSAALLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISAYFATDMERMEASLDDPYILIANSKIGSVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLNDIAILTGGEVIS
EEVGLKLENTTLDLLGKARKVVITKDETTIVDGAGSSEQVQGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SQVFEKLELEGDEATGANAVKLALEAPLKQIAVNGGLEGGVVVEKVRGLQVGHGLNAATG
EYVDMIAEGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAAAPGGMPGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcgcggcgcggcctcgagcgcggcatgaac
cagctcgcggacgccgtgaaggtgacgctcggccccaagggccgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctggaggacccgtacgagaagatcggcgccgagctggtcaaggaagtcgccaagaagacg
gacgacgtcgccggtgacggtacgaccaccgcgaccgtgctcgcccaggcgctggtccgc
gagggcctgcgcaacgtcgccgccggtgccaacccgatggccctgaagcgcggtatcgag
aaggccgtcgaggccgtctccgccgccctgctggagcaggcgaaggacgtcgagaccaag
gagcagatcgcctccacggcctccatctccgccgccgacacccagatcggcgagctgatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcccagacc
ttcggtctggagctggagctcaccgagggtatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgacatggagcgtatggaggcgtccctggacgacccgtacatcctgatc
gccaactccaagatcggctccgtcaaggacctgctcccgctgctggagaaggtcatgcag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcgaccctg
gtcgtgaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggc
gaccgccgcaaggcgatgctgaacgacatcgccatcctcaccggcggcgaggtcatctcc
gaggaggtcggtctcaagctcgagaacacgaccctcgacctcctgggcaaggcccgcaag
gtcgtcatcaccaaggacgagaccacgatcgtcgacggcgccggctcctcggagcaggtc
cagggccgggtcaaccagatccgcgccgagatcgagaacagcgactcggactacgaccgc
gagaagctccaggagcgcctggccaagctcgccggtggtgtcgcggtcatcaaggccggt
gccgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtgcgcaac
gccaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctccaggcc
tcccaggtgttcgagaagctggagctcgagggtgacgaggcgaccggcgccaacgccgtg
aagctcgcgctggaggccccgctcaagcagatcgccgtcaacggtggtctcgagggtggc
gtcgtcgtggagaaggtccgcggtctccaggtcggccacggcctgaacgccgcgaccggc
gagtacgtcgacatgatcgccgagggcatcatcgacccggcgaaggtgacccgttccgcg
cttcagaacgccgcctccatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgccgcggccgctccgggcggcatgccgggcggtgacatggacttc
tga
DBGET
integrated database retrieval system
