Streptomyces davaonensis: BN159_5219
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Entry
BN159_5219 CDS
T02518
Symbol
sigF9
Name
(GenBank) RNA polymerase sigma-F factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sdv
Streptomyces davaonensis
Brite
KEGG Orthology (KO) [BR:
sdv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdv03021
]
BN159_5219 (sigF9)
Transcription machinery [BR:
sdv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BN159_5219 (sigF9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_24
MarR_2
HTH_3
HTH_Crp_2
HTH_31
GerE
NirdL-like_HTH
MarR
Apolipoprotein
HTH_37
IF2_N
DUF7343
Motif
Other DBs
NCBI-ProteinID:
CCK29598
UniProt:
K4R8B4
LinkDB
All DBs
Position
complement(5808697..5809590)
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AA seq
297 aa
AA seq
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MSPRLDAPHTHKATSTSPPEQLTPIEQDDVLAGLPEIPPYDEVGPVDARALSKTLFGRLE
SLEEGTHEYSYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAIDRFELSR
GVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQKLDRAPTVAEL
AERLGISADEVVEGMAASNAYTASSLDAQPEEDDAEGALADRIGYEDHGLEGIEYVESLK
PLIAELPPRDRKILSLRFVAGLTQSEIGEELGISQMHVSRLLSRTLVRLRKGLTLEE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgcaccgcatacccacaaggcgacgtcgacatcccccccggaa
cagctgactcccatcgagcaggacgacgtactcgcgggactaccggagatacccccttac
gacgaagtggggccggtggacgcacgggccctgtccaagaccctcttcgggcggctggag
tcgctggaggaagggacccacgagtactcgtacgtccgcaacacgctcgtcgaactcaac
ctcgcgctggtcaagttcgccgcctcccgcttccgctcgcgcagcgagcccatggaggac
atcatccaggtcggcaccatcggcctgatcaaggcgatcgaccgcttcgagctcagccgc
ggcgtggagttccccaccttcgcgatgcccaccatcgtgggcgagatcaagcgcttcttc
cgggacacctcctggtccgtgcgggtcccgcgccgactccaggaactccggctcgacctg
gccaaggcgggcgacgaactcgcccagaagctcgaccgcgccccgacggtggccgaactc
gccgagcgcctcgggatctccgccgacgaggtcgtcgagggcatggccgcgtcgaacgcc
tacaccgcctcctcgctggacgcccagccggaggaggacgacgccgagggcgcgctcgcc
gaccggatcggctacgaggaccacggactcgaaggcatcgagtacgtcgagtccctgaag
ccgctgatcgccgaactcccgccccgggaccggaagatcctctccctgcgcttcgtcgcg
ggactgacccagtcggagatcggtgaggaactgggcatctcgcagatgcatgtctcccgg
ctgctgtcacggacgttggtgcggctgcgcaaggggctgacgctggaggagtag
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integrated database retrieval system
