Streptomyces davaonensis: BN159_5554
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Entry
BN159_5554 CDS
T02518
Name
(GenBank) DNA-binding protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sdv
Streptomyces davaonensis
Pathway
sdv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BN159_5554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdv03400
]
BN159_5554
Enzymes [BR:
sdv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BN159_5554
DNA repair and recombination proteins [BR:
sdv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN159_5554
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
NAT10_TcmA_helicase
PIF1
AAA_16
NPHP3_N
PhoH
TraI_hel_assoc_N
HTH_IclR
DEAD
nSTAND3
UvrD-helicase
AAA
Motif
Other DBs
NCBI-ProteinID:
CCK29933
UniProt:
K4R9B7
LinkDB
All DBs
Position
6187373..6189607
Genome browser
AA seq
744 aa
AA seq
DB search
MSNPAVVEGVLERITYANEENGYTVARVDTGRGGGDLLTVVGALLGAQVGESLRMEGRWG
SHPQYGKQFTVENYTTLLPATVQGIRRYLGSGLVKGIGPVFADRITQHFGLDTLKIIEEE
PKRLIEVPGLGPKRTRKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIYKKYGDASISVV
KNQPYRLAADVWGIGFLTADKIAQSVGIPHDSPERVKAGLQYALSQASDQGNCYLPEERL
IADAVKLLQVDTGLVIECLAELAVPDEESGDPGVVREKVPGPDGGDPVTAVYLVPFHRAE
LSLSGQLLRLLRTDEDRMPGFRDVAWDKALAWLKGRTGAELAPEQEAAVKLALTEKVAVL
TGGPGCGKSFTVRSVVELARAKKAKVLLAAPTGRAAKRLAELTGAEASTVHRLLELKPGG
DAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLFVGDVDQLPSVGAGEVLR
DLLAEGGPVPAVRLTRVFRQAQQSGVVTNAHRINSGQHPVTDGMKDFFLFVEDDTEEAGR
LTVDVAARRIPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAITPGRPDLPEKRFGG
RVFRVGDKVTQIRNNYDKGANGVFNGTVGVVTSLDPVDQRLTVLTDEDEEVPYEFDELDE
LAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVLVGSRKAIGQA
VRTVSAGRRCTALDFRLAPRALEV
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccggcggtggtcgaaggtgtgctggaacgcatcacgtacgccaatgaggag
aacggctacacggtcgcccgcgtcgacaccggacgcggtggcggcgatctcctcacggtg
gtcggtgcgctgctcggcgcccaggtgggcgagtccctgcggatggaggggcgttggggt
tcgcatccgcagtacggcaagcagttcaccgtcgagaactacacgaccctgctcccggcc
accgtccagggcatccgccgttatctcggctcggggctggtcaagggcatcgggccggtc
ttcgccgaccgcatcacccagcacttcggactggacaccctgaagatcatcgaggaggag
cccaagcggctcatcgaggtccccgggctcggccccaagcggaccaggaagatcgccgac
gcctgggaggagcagaaggcgatcaaggaggtcatgctcttcctccagaccgtcgaggtc
tccacctccatcgcggtgcgcatttacaagaagtacggcgacgcctcgatctccgtcgtg
aagaaccagccctaccgcctcgccgccgacgtctggggcatcggcttcctcaccgccgac
aagatcgcccagtccgtcggcatcccgcacgacagcccggagcgggtcaaggcgggcctc
cagtacgccctgtcccaggcgagcgaccagggcaactgctacctccccgaggagcggctg
atcgccgacgcggtgaagctgctccaggtcgacaccggtctcgtcatcgagtgcctcgcc
gaactggccgtaccggacgaggagtccggcgaccccggcgtcgtacgggagaaggtgcca
ggtcccgacggcggcgatcccgtcaccgccgtctacctcgtccccttccaccgcgccgaa
ctctccctctccggccagctgctccgcctgctgcgcaccgacgaggaccgtatgccgggc
ttccgggacgtggcctgggacaaggcgctggcctggctgaagggccgtacgggcgccgag
ctggcccccgagcaggaggccgccgtcaagctggcgttgaccgagaaggtggcggtcctg
accggtgggccgggctgcggcaagtccttcaccgtccgctcggtcgtcgaactggcccgc
gccaagaaggcgaaggtgctgctcgccgcccccaccggccgcgccgccaaacgcctggcc
gagctgaccggcgccgaggcctccaccgtgcaccgcctgctggagctgaagcccggcggg
gacgcggcgtacgacagggaccggcccctcgatgccgacctcgtcgtcgtcgacgaggca
tccatgctcgacctcctcctcgccaacaagctcgtcaaggccgtgccgcccggggcgcac
ctcctcttcgtcggggacgtcgaccagttgcccagcgtcggcgcgggggaggtgctgcgg
gatctgctcgccgagggcggccccgtccccgccgtccggctcacccgggtcttccgccag
gcccagcagtccggcgtggtcaccaacgcgcaccggatcaactccgggcagcatcccgtc
accgacggcatgaaggacttcttcctcttcgtcgaggacgacaccgaggaggcaggccgg
ctcaccgtggacgtggccgcccgtcggattccggccaaattcgggctggacccgcggagg
gacgtccaggtgctcgcgcccatgcaccggggaccggccggcgccggcaccctcaacggc
ctgctccagcaggccatcacccccggccgccccgacctgcccgagaagcggttcggcggc
cgggtcttccgcgtcggggacaaggtcacccagatccgcaacaattacgacaagggtgcc
aacggcgtcttcaacggcacggtgggcgtggtcacctcgctcgacccggtcgaccagcgc
ctgacggtgctgaccgacgaggacgaggaggtgccgtacgagttcgacgagctggacgag
ttggcgcacgcctacgcggtgaccatccatcgctcgcagggcagcgagtacccggcggtg
gtgatcccggtcaccacgggcgcctggatgatgcttcagcggaacctgctctacaccgcc
gtcacccgcgccaaacgcctggtcgtgctggtcggctcacgcaaggcgatcggtcaggcg
gtgcgcacggtctcggcgggacggcgctgcacggccctggacttcaggctcgcaccacgc
gcgctggaggtgtga
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integrated database retrieval system
