Streptomyces davaonensis: BN159_6622
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Entry
BN159_6622 CDS
T02518
Symbol
pel
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sdv
Streptomyces davaonensis
Pathway
sdv00040
Pentose and glucuronate interconversions
sdv01100
Metabolic pathways
sdv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BN159_6622 (pel)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN159_6622 (pel)
Enzymes [BR:
sdv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BN159_6622 (pel)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
CCK31001
UniProt:
K4R400
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All DBs
Position
7427813..7429141
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AA seq
442 aa
AA seq
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MNSQVWHGHAIGRTVVLAGCVSLVLGVTGAGVSVGAAQAGSARDLGREVLAAGDGWASEG
AGTTGGSAADAAHVYTVSTWAEFKAALAEDGTAPRIIKVKGMIDAVSEGCDALAAEGYDF
QRYLADYDPAVWGHDTPVSGEQEELRAASAVNQDKMIKANVPADTTIVGVGRDSGIRGGS
LQIKAVDNVILRNLTIEAPVDCFPQWDPTDDNKTGAWNSEYDGVVVHGSTHVWVDHNTLT
DGRYPDSALPEYFGKVYQQHDGLVDVVRGGNFVTVSWNSFNDHDKTMLIGNSDSAGSTDT
GKLKVTLHHNRFEGIVERAPRVRFGQVDSYNNHFVVTGGQKFGYVFGIGASSQLHATDNA
FTLASGVSTGKVLKKWNEAPLTAENNYVNGKPTDLIAVHNAEIPAETLRSGAGWTPTLRT
KVDHPRAVPGIVDHRAGAGRIC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacaggtatggcatgggcatgccatagggagaaccgtcgtactggcgggctgc
gtctcgctcgtcctcggtgtcaccggagccggtgtcagtgtcggtgccgcccaggccggg
tcggcccgtgacctcgggcgtgaggtgctcgccgccggggacgggtgggcctcggagggc
gccgggaccaccggcggttcggccgccgacgcagcgcatgtgtacaccgtgtccacctgg
gcggagttcaaggccgcgctcgcggaggatggcaccgcgccccggatcatcaaggtcaag
ggcatgatcgacgccgtctccgagggctgtgacgcgctcgcggcggaggggtacgacttc
cagcggtacctcgccgactacgaccccgcggtgtgggggcacgacacccccgtcagcggt
gagcaggaggagctgcgggccgcgtcggccgtcaaccaggacaagatgatcaaggccaat
gtgcccgccgacaccaccatcgtgggcgtgggccgggactccgggatccggggcggcagc
cttcagatcaaggccgtcgacaatgtgatccttcggaacctcaccatcgaggccccggtc
gactgcttcccgcagtgggacccgaccgacgacaacaagaccggcgcctggaactccgag
tacgacggggtcgtggtccacggctccacccatgtgtgggtcgaccacaacacgctgacc
gacggccgctatcccgacagcgcgttgccggagtacttcggcaaggtctaccagcagcac
gacggcctggtggacgtggtgcgcggcggcaacttcgtgaccgtgtcctggaactccttc
aacgaccacgacaagaccatgctgatcggcaacagcgacagcgcgggctcgaccgacacc
ggcaagcttaaggtcacccttcaccacaaccgcttcgagggcatcgtggagcgggcgccg
cgcgtccggttcgggcaggtcgactcgtacaacaaccacttcgtggtgaccggcgggcag
aagttcggctacgtcttcggcatcggcgcctcctcccaactgcacgccaccgacaacgcc
ttcacgctggcgtccggggtgagcaccggcaaggtgctgaagaagtggaacgaggcgccg
ctcaccgccgagaacaactacgtcaacggcaagccgacggatctgatcgccgtgcacaac
gcggagatccccgccgagaccctccggtccggagcgggctggacgcccaccctgcgcacc
aaggtcgaccacccgcgggcggtcccgggcatcgtcgaccaccgtgcgggcgccggccgc
atctgctga
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