Streptomyces decoyicus: K7C20_04820
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Entry
K7C20_04820 CDS
T07553
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sdw
Streptomyces decoyicus
Pathway
sdw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
K7C20_04820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdw03400
]
K7C20_04820
DNA repair and recombination proteins [BR:
sdw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
K7C20_04820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
FeoC
Motif
Other DBs
NCBI-ProteinID:
QZY20339
LinkDB
All DBs
Position
1141250..1142236
Genome browser
AA seq
328 aa
AA seq
DB search
MRPTAKFSISFGLVTIPVAAYNATDSSTSVSFVRIHTADGGRVRNQPVCSLEDVEITPDE
IGRGYKPDDRDIVVPLSDDDLDALPLPTAKTLTILAFVAGGDIDPLQMGKGYYLGIDSPA
AAKPYVLLREAMERHQRVGLGKIALHGRETLAMIRPMEGALVMQVLLWPHQIRPMDGVLP
ERQPEVAPAEVAAAETLMDSFGELSEDDVHDHYREALEEIVAAKLAHREPDFPAGEEQPA
GQVMDLMAALQDSVRAARKSRGEDEETEGAPGGGGSGRSTKKSTAKKTAAKKTAAKKTTA
SKTAAKKTPAKKTAAAKKTAGRGGRRAG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccacggcgaagttctccatcagcttcggcctggtcacgatcccggtcgccgcg
tacaacgccacggacagctccacgtcggtcagctttgtacggatccatacggcggacggc
gggcgggtacgcaatcagcccgtgtgctcgctggaagacgtcgagatcaccccggacgag
atcggccggggctacaagcccgacgacagggacatcgtcgtaccgctgagcgacgacgat
ctggacgcgctgccgctgccgaccgcgaagacgctgacgatcctggccttcgtcgccggc
ggggacatcgacccgctacagatgggcaagggctactacctgggcatcgacagcccggcc
gcggccaagccctatgtgctgctgcgcgaggcgatggaacggcaccagcgcgtcgggctc
ggcaagatcgcgctgcacgggcgggagacgctcgccatgatccgcccgatggagggcgcg
ctggtcatgcaggtgctgctgtggccgcaccagatccgcccgatggacggggtgctgccc
gagcggcagccggaggtcgcccccgccgaggtggcggccgccgagacgctcatggattcc
ttcggcgagctgtcggaagacgatgtgcacgatcactaccgtgaggcgctggaggagatc
gtggcggcgaagctggcgcatcgcgagccggacttcccggccggtgaggagcagccggcc
ggccaggtgatggacctgatggcggcccttcaggacagcgtccgcgcggccaggaagtcc
cgcggcgaggacgaggagaccgagggcgccccgggtggtggcgggtccggccgcagcacg
aagaagagcaccgcgaagaagacagcagcgaagaagacggcggcgaagaagaccaccgcc
tcgaaaaccgccgccaagaagacgcctgccaagaagacggcagcggcgaagaagaccgcg
ggcaggggcgggcggcgggccggctga
DBGET
integrated database retrieval system
