Streptomyces decoyicus: K7C20_06340
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Entry
K7C20_06340 CDS
T07553
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sdw
Streptomyces decoyicus
Pathway
sdw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K7C20_06340 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdw03400
]
K7C20_06340 (ruvB)
Enzymes [BR:
sdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K7C20_06340 (ruvB)
DNA repair and recombination proteins [BR:
sdw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K7C20_06340 (ruvB)
RecFOR pathway proteins
K7C20_06340 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
DUF815
nSTAND3
Sigma54_activat
AAA_14
AAA_3
RNA_helicase
AAA_28
Sigma54_activ_2
TsaE
Zeta_toxin
AAA_18
AAA_25
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QZY14912
LinkDB
All DBs
Position
complement(1456416..1457510)
Genome browser
AA seq
364 aa
AA seq
DB search
MNWDDTAPHSTAEETATGAPDRLVGADADGEDTAVEAALRPKDLEEFVGQERVREQLDLV
LRAARARGATADHVLLSGAPGLGKTTLSMIIAAEMGAPIRITSGPAIQHAGDLAAILSSL
QEGEVLFLDEIHRMSRPAEEMLYMAMEDFRVDVIVGKGPGATAIPLELPPFTLVGATTRA
GLLPPPLRDRFGFTAHMEFYAPAELERVIHRSAGLLDLDIEPEGAAEIAGRSRGTPRIAN
RLLRRVRDYAQVKADGLITREIASQALGVYEVDARGLDRLDRAVLTALLKLFGGGPVGLS
TLAVAVGEERETVEEVAEPFLVREGLLARTPRGRIATPAAWAHLGLVPPQQQAGGSGQQG
LFGA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
gtgaactgggacgacaccgcaccgcacagcaccgccgaggagaccgccacgggcgccccc
gaccggttggtgggggccgacgcggacggcgaggacaccgccgtcgaggccgcgctgcgg
cccaaggacctcgaggaattcgtcggccaggagcgggtgcgcgaacagctcgacctggtg
ctgcgggccgcccgcgcccgcggcgccaccgccgatcatgtcctgctgtccggggcgcct
ggcctcggcaagacgaccctctcgatgatcatcgccgccgagatgggcgccccgatccgg
atcacctccggccccgccatccagcacgccggagacctcgccgcgatcctctcctccctc
caggagggcgaggtcctctttctcgacgagatccaccggatgtcccggcccgccgaggaa
atgctctacatggccatggaggacttccgcgtcgacgtgatcgtcggcaagggcccggga
gccaccgccatccccctcgaactccccccgttcaccctggtcggcgccacgacccgggcc
ggtctgctgccgcccccgctgcgcgaccgcttcggcttcacggcccatatggagttctac
gcccccgccgagctggagcgggtcatccaccgctcggccgggctgctggacctggacata
gaacccgagggcgccgccgagatcgccggccgctcccgcggcacgccccgtatcgccaac
cgcctgctgcgccgcgtccgcgactacgcccaggtgaaggccgacggcttgatcacccgc
gagatcgcctcccaggccctcggggtctacgaggtcgacgcccgcggcctggaccgtctc
gaccgcgccgtgctcacggccctgctcaagctgttcggcggcggtccggtgggcctgtcc
accctcgcggtcgcggtgggggaggagcgcgagaccgtcgaggaggtcgccgagcccttc
ctcgtacgggaagggctgctggccaggacccccagaggccggatcgcgaccccagcggcg
tgggcccatctgggactcgtgccgccgcagcagcaagcgggcggaagcgggcagcagggc
ttgttcggggcctga
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