Streptomyces decoyicus: K7C20_24795
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Entry
K7C20_24795 CDS
T07553
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sdw
Streptomyces decoyicus
Brite
KEGG Orthology (KO) [BR:
sdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdw03021
]
K7C20_24795
Transcription machinery [BR:
sdw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K7C20_24795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
PF0610-like_N
HTH_23
DUF7343
MarR_2
Sigma70_ECF
HTH_24
MarR
HTH_Crp_2
NirdL-like_HTH
HTH_3
IF2_N
HTH_ParB
HTH_AraC
GerE
Motif
Other DBs
NCBI-ProteinID:
QZY20766
LinkDB
All DBs
Position
complement(5601612..5602574)
Genome browser
AA seq
320 aa
AA seq
DB search
MASSATIPEQQARPHPVGVDDHGGRLDAAEQAERADHMEQSEQPGQPAHQHDAPAPEHQL
QEPQHSQAQPHDRSGARAMFYELRKLPDGSPERAELRNTLVRMHLPLVEHLARRFRNRGE
PLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQEL
RLSLTTATAELSQRHGRAPTVHELAEHLAISEEEVLEGLESANAYSTLSLDVPDTDDESP
AVADTLGAEDEALEGVEYRESLKPLLEDLPPREKKILLLRFFGNMTQSQIAQEVGISQMH
VSRLLARTLAQLRDKLLVEE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagtgcgaccatccccgagcagcaggcccggccgcatccggtgggagtggac
gaccacggcggccggttggacgcggcggagcaggcagagcgggcggaccacatggagcag
agcgagcagccgggacagccggcgcatcagcacgatgcgccggcccccgaacaccagctg
caggaaccacagcattcccaggcgcagccgcacgaccgcagcggcgcccgggcgatgttc
tacgagctgcgcaagctccccgacggctccccggagcgcgcggagctgcgcaacaccctc
gtccgtatgcacctcccgctcgtcgagcatctggcccggcggttccgcaaccgtggtgag
ccgctggacgatctgacccaggtcgccaccatcggcctgatcaagtccgtggaccgcttc
gacccggaccgcggcgtggagttctccacgtacgccacccccaccgtcgtcggcgagatc
aagcggcacttccgcgacaagggctgggcggtccgcgtcccgcgccgcctccaggagctg
cggctgtcgctcaccaccgcgaccgccgagctgtcccagcggcacgggcgcgcgcccacg
gtccatgagctggccgagcatctggcgatctccgaggaggaggtcctggaggggctggag
tccgccaacgcctacagcaccctctccctggacgtcccggacacggacgacgagtccccg
gccgtcgccgacaccctcggcgccgaggacgaggccctggagggcgtggagtaccgcgag
tccctcaaaccgttgctggaggacctcccgccgcgcgagaagaagatcctgctgctgcgc
ttcttcggcaacatgacccagtcgcagatcgcccaggaggtcggcatctcccagatgcac
gtctcccgcctgctggcccgcaccctcgcccagctgcgcgacaagctgctcgtcgaggag
tga
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