Streptomyces decoyicus: K7C20_26425
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Entry
K7C20_26425 CDS
T07553
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sdw
Streptomyces decoyicus
Pathway
sdw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
K7C20_26425 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdw03019
]
K7C20_26425 (rnc)
03009 Ribosome biogenesis [BR:
sdw03009
]
K7C20_26425 (rnc)
03036 Chromosome and associated proteins [BR:
sdw03036
]
K7C20_26425 (rnc)
Enzymes [BR:
sdw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
K7C20_26425 (rnc)
Messenger RNA biogenesis [BR:
sdw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K7C20_26425 (rnc)
Ribosome biogenesis [BR:
sdw03009
]
Eukaryotic type
90S particles
RNase
K7C20_26425 (rnc)
Prokaryotic type
rRNA processing factors
K7C20_26425 (rnc)
Chromosome and associated proteins [BR:
sdw03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
K7C20_26425 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QZY18339
LinkDB
All DBs
Position
5966331..5967149
Genome browser
AA seq
272 aa
AA seq
DB search
MSDANSTSRKRGDEPTPADTASSHTLLEGRLGYKLESALLVRALTHRSYAYENGGLPTNE
RLEFLGDSVLGLVVTDTLYRIHPDLPEGQLAKLRAAVVNSRALAGVGRGLDLGAFIRLGR
GEEGTGGRDKASILADTLEAVIGAVYLDQGLDAAGELVHRLFDPLIEKSSSLGAGLDWKT
SLQELTATEGLGVPEYLVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAW
REIRAAADEAAKVAEAEKAAETVDTAGEDTIG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgccaattcgacttcccgcaaacgcggggatgaaccgactccggcggacacg
gcctcgtcccacacgcttctggaagggcggctcgggtacaagctcgagtccgcccttctg
gtgcgtgcgctgacacaccgctcgtacgcatacgagaacggcggtctgcccaccaacgag
cggctcgaattcctcggggattcggtgctcggcctggtggtcacggacacgctgtaccgc
atccaccccgatctgccggaaggccagctggccaaactgcgggccgcggtggtcaactcg
cgtgcactcgccggggtgggccgcggcctcgacctcggcgccttcatccgcctcggacgg
ggcgaagagggcacgggcggccgggacaaggcatccatcctcgccgacacccttgaagcg
gtgatcggcgcggtctatctcgaccagggcctcgacgcggccggcgagctggtgcaccgg
ctcttcgacccgctcatcgagaagtcctccagcctgggcgcgggcctggactggaagacc
agcctccaggaactcaccgcgaccgagggtctcggcgttccggagtacctggtcacggag
accggtccggaccacgagaagacctttactgctgccgcccgcgtcggtggtgtctcgtac
ggcaccggcaccggccgcagcaagaaggaagccgagcagcaggcggccgaatccgcgtgg
cgcgagatccgcgccgcggcggacgaggcggccaaggtggccgaggcggagaaggcggcc
gaaaccgtcgacaccgccggcgaagacaccatcggctga
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