Streptomyces decoyicus: K7C20_26890
Help
Entry
K7C20_26890 CDS
T07553
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sdw
Streptomyces decoyicus
Brite
KEGG Orthology (KO) [BR:
sdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdw03016
]
K7C20_26890 (truB)
Enzymes [BR:
sdw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K7C20_26890 (truB)
Transfer RNA biogenesis [BR:
sdw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K7C20_26890 (truB)
Prokaryotic type
K7C20_26890 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QZY18425
LinkDB
All DBs
Position
6077561..6078490
Genome browser
AA seq
309 aa
AA seq
DB search
MKRESNKPGGLVIVDKPAGFTSHDVVAKMRGMARTRRVGHAGTLDPMATGVLVLGIERAT
KLLGHLALTEKEYVGTIRLGQTTITDDAEGELTASKAAHGLAREDIDAGVGRLSGAIMQV
PSKVSAIKINGKRSYSRVRDGEDVEIPARPVTVSSFVVHSAHETEAEDGTPVTDLLVSVE
CSSGTYIRALARDLGEGLGAGGHLTALRRTRVGPYKLDRARTLEQLQAAVDDTEGEGLPV
MPLGEAAAAAFTRWDVAESQARLLLNGARIPMPLFEGTGPIAAFGPDGRFLALVENQGGK
AKSLAVFAV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgagagcaacaagccgggcggtcttgtcatcgtcgacaagccggccggcttc
acttcgcacgacgtggtggcaaagatgcgcggtatggcgcgcacccgccgggtcgggcac
gccggcacgctcgacccgatggcgacgggcgtgctcgtcctgggcatcgagcgggccacc
aagctgctcggccacctggcgctgacggagaaggagtacgtcggcacgatccggctcggc
cagacgacgatcaccgatgacgccgagggcgagctcaccgcgtccaaggcggcgcacggt
ctcgcccgcgaggacatcgacgcgggcgtcggccggctgtccggcgcgatcatgcaggtc
ccgtcgaaggtcagcgccatcaagatcaacggcaagcggtcgtactcgcgggtgcgcgac
ggcgaggacgtggagatcccggcccggccggtcaccgtctcctcgttcgtggtgcactcc
gcgcacgagaccgaggccgaggacggcaccccggtgaccgatctgctggtctccgtcgag
tgctcgtccggtacgtacatccgtgccctggcccgtgacctgggcgagggcctcggggcc
ggcggccatctgacggcgctgcgccgcacccgcgtcggcccgtacaagctggaccgggcg
cgcacgctcgaacagctccaggccgccgtggacgacaccgagggggagggccttccggtc
atgccgctcggtgaggcggccgccgcggcgttcacccgctgggacgtcgccgagtcgcag
gcccggctgctgctcaacggcgcacggatcccgatgcccctgttcgaggggaccggcccg
atcgcggcgttcggaccggacggccggttcctcgcgctggtggagaaccagggcgggaag
gcgaagagcctggcggtgttcgcggtctag
DBGET
integrated database retrieval system
