Streptomyces decoyicus: K7C20_27470
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Entry
K7C20_27470 CDS
T07553
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sdw
Streptomyces decoyicus
Pathway
sdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K7C20_27470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdw03019
]
K7C20_27470
03400 DNA repair and recombination proteins [BR:
sdw03400
]
K7C20_27470
Enzymes [BR:
sdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K7C20_27470
Messenger RNA biogenesis [BR:
sdw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K7C20_27470
DNA repair and recombination proteins [BR:
sdw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K7C20_27470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Pribosyltran
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QZY18532
LinkDB
All DBs
Position
complement(6222781..6224946)
Genome browser
AA seq
721 aa
AA seq
DB search
MSNEDLRAAADAVLTRLVGDPSGEARLREDQWRAIEALVADHRRALVVQRTGWGKSAVYF
VATALLRERGSGPTVIVSPLLALMRNQVEAAARAGIRARTINSANTEEWDTVQAEVAAGD
VDVLLVSPERLNNPDFRDQVLPKLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTMLADL
PPGVPVLATTATANARVTADVAEQLGTGEGSTEALVLRGPLDRESLSLGVLPLPDAAHRL
AWLADHLHELPGSGIIYTLTVAAAEEVTAFLRQRGHTVSSYTGKTENADRQQAEDDLLAN
RVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVKHAEVLLLPGREDE
AIWKYFASLAFPPEEQVRRTLDVLAAAGRPVSLPALEPQVELRRSRLEIMLKVLDVDGAV
QRVKGGWTSTGRPWSYDAERYAWVSRQREAEQQAMREYATTTGCRMEFLRRQLDDEAAVV
CGRCDNCAGGRFTTEVSAASLDAARGELGRPGVEVEPRRMWPTGLPAVGVDLKGRIPAGE
LAATGRALGRLSDIGWGNRLRPMLAPQAPDGPVPDDVAAAVVTVLADWAKGPGGWASGAA
DAPARPVGVVALSSRSRPQLIRSLAERIAAVGRMPFLGAVTSADDGFDGRIPRSNSAQRL
RALHGSLSVPPELAQALASAGGPVLLVDDFADTGWTLAMAARLLRRAGAEGVFPLVLAVQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaagatctgcgtgccgcagccgatgccgtcctgacccgactcgtcggggat
cccagcggcgaggccaggctgcgcgaggatcagtggcgggcgatcgaggcgctggtcgcc
gaccaccgccgcgccctggtcgtgcagcgcacgggctggggcaagtccgcggtctatttc
gtcgcgacggcgctgctgcgcgagcgcggcagcggcccgaccgtgatcgtctccccgctg
ctcgcgctgatgcgcaatcaggtcgaggctgccgcgcgggccggcatccgcgcccgcacg
atcaactccgccaacaccgaggaatgggacacggtccaggccgaggtggcggccggcgac
gtggatgtcctgctggtgagccccgagcggctcaacaaccccgatttccgcgatcaggtg
ctgcccaagctcgcggcggcgaccggtctgctggtggtcgacgaagcgcactgcatctcc
gactggggccatgacttccgtccggactaccggcggctgcgcacgatgctcgccgatctt
ccgcccggtgtgcccgtgctcgccaccaccgccacggccaacgcgcgggtgaccgccgat
gtcgccgagcagctcgggacgggcgagggctccaccgaggcgctggtgctgcgcgggccg
ctggaccgggagagcctgagcctgggcgtcctcccgctgccggacgccgcgcaccgcctc
gcctggcttgcggaccatctgcacgagctgccgggctcggggatcatctatacgctcacc
gtggccgccgccgaggaggtcacggccttcctgcgccagcgggggcacacggtctcctcg
tacaccggcaagacggagaacgccgaccgtcagcaggccgaggacgatctgctcgccaac
cgcgtcaaggcgctggtggcgacctcggcgctgggcatgggcttcgacaagcccgacctg
ggtttcgtggtgcatctgggctcgccgtcgtcccccatcgcgtactaccagcaggtgggc
cgggccggccgtggggtcaagcacgccgaggtcctgctgctccccgggcgggaggacgag
gcgatctggaagtacttcgcgtcactggcgttcccgcccgaggagcaggtgcggcggacc
ctggacgtccttgcggcagccggcaggccggtgtccctgccggccctggagccgcaggtc
gaactgcgccgctcgcgccttgagatcatgctcaaggtcctcgacgtggacggcgccgtg
caacgcgtcaagggtggctggacgtccaccggccgtccgtggtcgtacgacgccgagcgc
tatgcgtgggtgtcgcgtcagcgcgaggccgaacagcaggcgatgcgggagtacgccacc
acaacgggctgccggatggagttcctgcggcggcagttggacgacgaggcggccgtcgtg
tgcgggcgctgcgacaactgcgccggggggcggttcaccaccgaggtgtccgccgcatcg
ctggatgcggcgcgcggcgagctgggacggcccggcgtggaagtggagccgcggcgcatg
tggcccacggggttgccggccgtcggcgtcgacctcaaggggcgtatcccggcaggtgag
ctggccgcgaccggccgggccctggggcggctctccgacatcgggtggggcaaccgcctg
cggccgatgctcgcaccgcaggctccggacggtccggttccggacgatgtggcggccgcc
gtggtcacggtgctcgccgactgggccaaggggccgggtggttgggcctcgggtgcggct
gatgcaccggcccgcccggtgggcgtcgtcgcgctctcctcgcgcagccgcccgcagctg
atccggtcactggccgagcggatcgccgcggtcggccgcatgccgttcctgggcgcggtg
acctcggcggacgacggattcgacggcaggattccgcgtagcaacagcgcccagcggctg
cgggctctgcacggctcgctgagcgtaccgccggagctggcgcaggctctggcgtcggcg
ggcggcccggtgctgttggtggacgacttcgccgataccggctggacgctggccatggct
gcccggctgctgcgccgggcgggcgcggagggggtgtttccgctggttctcgccgtacag
ggctag
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