Streptomyces dengpaensis: C4B68_08735
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Entry
C4B68_08735 CDS
T06611
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sdx
Streptomyces dengpaensis
Pathway
sdx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4B68_08735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdx03000
]
C4B68_08735
03400 DNA repair and recombination proteins [BR:
sdx03400
]
C4B68_08735
Enzymes [BR:
sdx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
C4B68_08735
Transcription factors [BR:
sdx03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C4B68_08735
DNA repair and recombination proteins [BR:
sdx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C4B68_08735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
DUF6918
DUF7437
DUF6233
Motif
Other DBs
NCBI-ProteinID:
AVH61061
LinkDB
All DBs
Position
complement(1897725..1899122)
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AA seq
465 aa
AA seq
DB search
MDEDSRYEAVRSRDARFDGEFFFAVATTGIYCRPSCPAVTPKRQNVRFYATAAAAQGSGF
RACRRCRPDAVPGSAEWNVRADVVGRAMRLIGDGVVDREGVGGLAVRLGYSARQVQRQLT
AEVGAGPVALARAQRAHTARVLLQTTDLPITQIAFAAGFASVRQFNDTIRAVYASTPSEL
RAAAPRAGSAARRAATPSAGLPLRLAYRGPYQSTAVFDLLAAEAITGVEDVSGARGHRTY
RRTLRLPYGTGIVAVEERPGGPGGWLDARLHLTDLRDLTTAVQRLRRLFDLDADPYAVDE
RLGADPRLGPLVVARPGLRSPGAADPDELAVRALVGVAEAERLVERYGKALDAPCGTLTH
VFPEPAVLAEAEPDGILGALTAALADGTLRLDAGADRDDAQEALLALPGMDDRTAAVIRT
RALGDPDVAPPGEDVPDAWRPWRSYAAQHLRDVREFDDLASSLSP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atcgacgaagacagcaggtacgaggccgtgcggagccgggatgcccggttcgacggggag
ttcttcttcgccgtcgcgacgacggggatctactgcaggccgagctgccccgcggtgacc
ccgaagcggcagaacgtccggttctacgccacggcggccgccgcgcagggctccggcttc
cgggcctgtcgcagatgccggccggacgccgtacccggttcggcggagtggaatgtacgg
gcggacgtcgtcggccgggccatgcgcctgatcggcgacggcgtcgtcgaccgcgagggc
gtcggcggtctcgcggtgcgcctcgggtacagcgcccgccaggtgcaacggcagctcacc
gcggaggtcggcgcgggcccggtcgccctggctcgcgcccagcgtgctcacaccgcgcgg
gtactgctgcagaccaccgaccttccgatcacgcagatcgcgttcgcggcggggttcgcc
agcgtgcgccagttcaacgacacgatccgtgcggtgtacgcctcgacgccgagcgagctg
cgcgcggccgccccgcgtgccggctccgccgcgcggcgagcggccacccccagcgccggg
cttcccctccggctcgcctaccgggggccgtaccagtccaccgccgtcttcgatctgctc
gccgccgaggcgatcaccggggtcgaggacgtcagcggggcccgcggccaccgcacgtac
cggcgcaccctccgactcccgtacggcacgggaatcgtcgccgtcgaggagcggccgggt
gggcccggcggctggctcgacgcccggctgcatctcaccgatctccgtgatctcaccacc
gccgtccagcggctgcgcaggctgttcgacctcgatgccgatccctacgccgtcgacgag
cggttgggcgccgacccccggctggggccgctggtcgtcgcgcgtccggggctgcgttcg
ccgggcgccgccgacccggacgagctggcggtgcgggcgctggtgggggtggcggaggcc
gagcggctggtggagcggtacgggaaggcgttggacgccccgtgcggcacgctcacccat
gtgttcccggaaccggccgtactcgccgaggccgagccggacggcatcctcggcgctctg
accgccgccctcgccgacgggaccctgcggctcgacgcgggcgccgaccgcgacgacgcg
caggaggcgctgctcgcgctgcccggcatggacgaccgcaccgccgccgtcatccgcacc
cgcgccctcggcgatcccgacgtggccccgcccggcgaggacgtaccggatgcctggcgc
ccgtggcgttcctatgccgcgcaacacctcagggacgtacgggagtttgacgacctggcc
tcgagcctgtctccttga
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