Streptomyces dengpaensis: C4B68_09670
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Entry
C4B68_09670 CDS
T06611
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
sdx
Streptomyces dengpaensis
Pathway
sdx00523
Polyketide sugar unit biosynthesis
sdx01100
Metabolic pathways
sdx01110
Biosynthesis of secondary metabolites
sdx01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C4B68_09670
Enzymes [BR:
sdx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
C4B68_09670
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Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AVH55996
UniProt:
A0A2L2MHD4
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Position
2132107..2133411
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AA seq
434 aa
AA seq
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MSDPKEQVLEAVRAYHRVSAPEREFVPGTTEIWPSGAVLEEEDRVALVEAALEMRIAAGR
SQRKFESAFARRLKRRKAHLTNSGSSANLLAVSALTSPALEDRRLKPGDEIVTVAAGFPT
TVNPILQNGLIPVFVDVDLTTYNATADRVAAAIGPKTRAIIIAHALGNPFEVTAIAQLAE
EHDLFLIEDNCDAVGSLYDGQLTGTFGDMTTVSFYPAHHLTMGEGGCVLTSNLALARIVE
SLRDWGRDCWCEPGENDKCLKRFTYQMGTLPAGYDHKYIFSHVGYNLKATDIQAALGLTQ
LAKLDDFIDARKRNWRRLREGLDGVPGLLLPEATPRSDPSWFGFVLTVDPEAPFGRAELV
DFLEDRRIGTRRLFAGNLTRHPAYIGRPHRVVGELTNSDIITEHTFWIGVYPALTDEMLD
YVTASIKEFVAARG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccccaaggaacaggtgctcgaagcggttcgggcgtaccaccgagtgagcgcc
ccggagcgggagttcgtgcccggcaccacggagatctggccgtcgggcgcggtcctggag
gaggaggaccgggtggcgctggtggaggccgccctggagatgcggatcgccgccgggcgc
agccagcgcaagttcgagtcggcgttcgcgcggcggctgaagcggcgcaaggctcatctc
accaactcgggctcgtcggcaaacctgctggccgtctcggcgctcacctcccccgccctg
gaggaccggcggctgaagccgggcgacgagatcgtcaccgtcgcggcgggcttccccacc
accgtcaacccgatcctgcagaacgggctcatcccggtcttcgtcgacgtcgacctcacg
acgtacaacgcgaccgccgaccgggtcgccgcggccatcgggccgaagacgcgcgccatc
atcatcgcgcacgcgctcggcaaccccttcgaggtcacggcgatcgcgcaactcgccgag
gagcacgacctgttcctcatcgaggacaactgcgacgcggtgggctcgctctacgacggg
cagctcaccggcaccttcggcgacatgacgacggtcagcttctatccggcgcaccacctc
accatgggcgagggcggttgtgtgctgacctcgaacctggcgctggcgcggatcgtggag
tcgctgcgcgactggggacgcgactgctggtgcgagccgggcgagaacgacaagtgcctc
aaacggttcacgtaccagatgggcacgctgccggccgggtacgaccacaagtacattttc
tcgcacgtcggttacaacctgaaggccaccgacatccaggccgccctgggcctgacccag
ctcgccaagctggacgacttcatcgacgcccgcaagcgcaactggcggcggctgcgcgag
gggctggacggcgttccgggactgctgctgccggaggcgacgccccgctccgacccgagc
tggttcgggttcgtgctcaccgtggaccccgaggctccgttcggccgcgccgagctggtg
gacttcctggaggaccgcaggatcggcacgaggcggctgttcgccggcaacctcacccgg
caccccgcctacatcggccggccccatcgtgtcgtcggcgagctgacgaacagcgacatc
atcacggagcacaccttctggatcggggtctacccggcgctcaccgacgaaatgctggac
tacgtgaccgcgtcgatcaaggagttcgtggccgcgcgcggctga
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