Streptomyces dengpaensis: C4B68_10540
Help
Entry
C4B68_10540 CDS
T06611
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sdx
Streptomyces dengpaensis
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sdx03009
]
C4B68_10540 (rimO)
Enzymes [BR:
sdx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C4B68_10540 (rimO)
Ribosome biogenesis [BR:
sdx03009
]
Prokaryotic type
ribosomal protein modification factors
C4B68_10540 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AVH56138
UniProt:
A0ABM6SP30
LinkDB
All DBs
Position
complement(2342860..2344335)
Genome browser
AA seq
491 aa
AA seq
DB search
MPERRTVALVTLGCARNEVDSEELAGRLEADGWQLVEDAEEADVAVVNTCGFVEAAKKDS
VDALLEANDLKGRGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQSAGEEVALPGHGAPSDLPQGVAPVSGPRAPLRRRL
DGAPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVVNEARWLADQGVKEIMLVSENN
TSYGKDLGDIRLLETLLPELAEIEGLERVRVSYLQPAEMRPGLIDVLTSTPNIASYFDLS
FQHSAPDVLRAMRRFGDTDRFLELLDTIRAKAPQAGVRSNFIVGFPGETEADLAELERFL
TGARLDAIGVFGYSDEEGTEAATYENKLHEDVVAERLARVSRLAEELVAQRAEERVGETV
YVLVESLDGDEGAYGRAAHQAPETDGQVLFTSGEGLTVGRIVEAKVVGTEGVDLVAEPLL
GSLPCTEEAGR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactcgtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggaggcggacggctggcaactcgtggaggacgccgag
gaagcggacgtcgccgtcgtcaacacctgtggcttcgtcgaggccgccaagaaggactcc
gtcgacgccctcctagaagccaatgatctcaagggacgtggcagaacccaggccgtcgtg
gcggtgggctgcatggccgagcggtacggcaaggagctcgccgaggcgctgcccgaggcc
gacggcgtactcggcttcgacgactacgccgacatctccgaccgcctccagaccatcctg
aacggcggcatccacgcctcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
ccggccgagcggcagagcgccggtgaggaagtggcccttcccggccatggcgccccctcg
gacctcccccagggcgtggccccggtgtcggggccccgcgcgcccctgcgccgccgcctc
gacggcgcgcccgtcgcctcggtgaagctcgcctccggctgcgaccggcgctgctccttc
tgcgccatcccgtctttccggggttcgttcatctcgcgccgccccagcgacgtagtgaac
gaggcgcgctggctggccgatcaaggcgtcaaggagatcatgctggtctccgagaacaac
acctcgtacggcaaggacctgggcgacatccgcctcctggagaccctgctgcccgagctc
gccgagatcgagggcctggagcgtgtgcgggtcagctacctgcagcccgccgagatgcgt
cctggactcatcgacgtcctgacctcgacgccgaacatcgcgtcctacttcgacctgtcc
ttccagcactccgcgcccgacgtgctgcgcgcgatgcggcgcttcggcgacaccgaccgc
ttcctggaactgctcgacaccatccgcgccaaggccccgcaggccggtgtgcggtccaac
ttcatcgtgggcttccccggcgagaccgaggccgacctcgcggagctggagcggttcctc
acgggcgcccgcctcgacgcgatcggtgtcttcgggtattccgacgaggagggcaccgag
gcggcgacgtacgagaacaagctgcacgaggacgtcgtcgccgagcgcctcgcgcgcgtg
tcccggctcgccgaggaactggtcgcgcagcgcgccgaggagcgcgtcggcgagaccgtc
tacgtgctcgtggagtccctcgacggcgacgagggcgcgtatggccgtgccgcgcaccag
gcgcccgagacggacggccaggtgctgttcacgagcggcgaaggtctgaccgtcggccgt
atcgtcgaggccaaggtggtcggtacggaaggtgtagacctggtggccgagcctctcctg
ggctcactcccgtgtactgaggaggcgggcagatga
DBGET
integrated database retrieval system
