KEGG   Streptomyces dengpaensis: C4B68_10810
Entry
C4B68_10810       CDS       T06611                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
sdx  Streptomyces dengpaensis
Brite
KEGG Orthology (KO) [BR:sdx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sdx03016]
    C4B68_10810
Enzymes [BR:sdx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     C4B68_10810
Transfer RNA biogenesis [BR:sdx03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    C4B68_10810
 Prokaryotic type
    C4B68_10810
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: AVH56181
UniProt: A0ABN5HYF7
LinkDB
Position
complement(2414831..2415736)
AA seq 301 aa
MTQKHRTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVEKAT
KLLGHLALTEKEYLGTIRLGQSTLTDDAEGDITSSTDASGVKRDAVDAGIAKLTGDIMQV
PSKVSAIKIDGVRSYKRAREGEDFEIPARPVTISSFAVYDVRDAVAEDGTPVLDLVVSVV
CSSGTYIRALARDLGADLGVGGHLTALRRTRVGPYKLDSARTLGQLQEELTVMPIAEAAA
AAFPRWDVDAKRARLLLNGVRLEMPEEYAGKGPVGVFDPEGRFLALVEEQKGKAKSLAVF
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacccagaagcaccggacgcccgacgggcttgtcatcgtcgacaagccgtcggggttc
acttcgcacgacgtggtcgccaagatgcgcgggatcgccaggacccgccgcgtcggacac
gccggcaccctcgaccccatggcgacgggcgtgctcgtcctcggcgtcgagaaggcgacc
aagctcctcggacacctcgcgctgaccgagaaggagtacctgggcaccatcaggctcggc
cagagcacgctcaccgacgacgccgagggtgacatcacgtcgtccaccgacgcctccggc
gtgaagcgggatgccgtcgacgccgggatcgccaagctgaccggcgacatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcgacggcgtgcgctcgtacaagcgggcgcgcgag
ggcgaggacttcgagatcccggcccgtccggtgaccatctcgtcgttcgcggtgtacgac
gtccgtgacgccgtcgccgaggacgggaccccggtactcgacctggtcgtctccgtcgtc
tgctcgtccgggacgtacatccgggcgctggctcgcgacctgggcgcggacctgggcgtc
ggcggtcatctcaccgccctgcgccgcacccgcgtcggcccgtacaagctcgactccgcg
cgcaccctcggtcagctccaggaggagctgaccgtgatgccgatcgcggaggcggccgcc
gccgcgttcccgcgctgggacgtggacgccaagcgggcgcggctgctgctgaacggcgta
cgcctggagatgcccgaggagtacgcgggcaagggccccgtcggggtcttcgatcccgag
gggcggttcctcgcgctggtggaggagcagaaggggaaggcgaagagcctggccgtgttc
ggctga

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