Streptomyces dengpaensis: C4B68_11330
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Entry
C4B68_11330 CDS
T06611
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sdx
Streptomyces dengpaensis
Pathway
sdx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4B68_11330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdx03400
]
C4B68_11330
Enzymes [BR:
sdx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
C4B68_11330
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
C4B68_11330
DNA repair and recombination proteins [BR:
sdx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C4B68_11330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AVH56268
UniProt:
A0A2L2MI65
LinkDB
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Position
complement(2527422..2528282)
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AA seq
286 aa
AA seq
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MPELPEVEVVRRGLARWVSGRVVKTVEVGHPRAVRRHLAGPEGFAQALAGQRFGEAMRRG
KYLWLLLDDSPFSVLAHLGMSGQLLVRPEDAPDEKHLRIRVRFEDGQGTELRFVDQRTFG
GLSLHENTPEGLPEVIAHIARDPLDPLFDDAAFHTALRARRTTIKRALLDQSLISGVGNI
YADEALWRSKLHYERPTGSFTRPRTAELLGHIRDVMNDALAAGGTSFDSLYVNVNGESGY
FDRSLDAYGREGEPCRRCGTPMRRRAWMNRSSYFCPRCQRPPRPSA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagttgcccgaggtcgaagtcgtgcggcggggcctggcgcgctgggtcagcggg
cgggtcgtgaagacggtcgaggtgggtcatccccgggccgtgcggcggcatctggccggg
cctgagggcttcgctcaggcgctcgccgggcagcggttcggggaggccatgcggcgcggc
aagtatctgtggctgctcctggacgactccccgttctccgtgctcgcgcacctcggtatg
agcggccagctcctggtgcggccggaggacgctccggacgagaagcatctgcgcatccgt
gtgcgcttcgaggacgggcagggcaccgagctgcgcttcgtcgaccagcgcaccttcggc
gggctctccctgcatgagaacacccccgaggggctgccggaggtcatcgcgcacatcgcc
cgcgacccgctcgaccccctcttcgacgacgccgcgttccacacggccctgcgcgcccgt
cgtacgacgatcaagcgcgccctgctcgaccagtcactgatcagcggggtcggcaacatc
tacgcggacgaggcgctctggcgttccaagctgcactacgaacgccccacgggatccttc
acccggccgcgcaccgccgaactcctcggccacatccgcgacgtcatgaacgacgccctc
gccgccggcggcaccagcttcgacagcctgtacgtcaacgtcaacggggagtccggctac
ttcgaccgctcgctcgacgcgtacgggcgtgagggcgagccctgccggcgctgcgggaca
ccgatgcggcggcgcgcctggatgaaccggtccagctacttctgcccgcgctgccagcgg
ccaccccgcccgtcggcctga
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