Streptomyces dengpaensis: C4B68_11335
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Entry
C4B68_11335 CDS
T06611
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sdx
Streptomyces dengpaensis
Pathway
sdx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C4B68_11335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdx03019
]
C4B68_11335
03009 Ribosome biogenesis [BR:
sdx03009
]
C4B68_11335
03036 Chromosome and associated proteins [BR:
sdx03036
]
C4B68_11335
Enzymes [BR:
sdx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
C4B68_11335
Messenger RNA biogenesis [BR:
sdx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C4B68_11335
Ribosome biogenesis [BR:
sdx03009
]
Eukaryotic type
90S particles
RNase
C4B68_11335
Prokaryotic type
rRNA processing factors
C4B68_11335
Chromosome and associated proteins [BR:
sdx03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
C4B68_11335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AVH56269
UniProt:
A0ABM6SP64
LinkDB
All DBs
Position
complement(2528536..2529366)
Genome browser
AA seq
276 aa
AA seq
DB search
MSDAKADTNAKKKADNTASSHTLLEGRLGYKVESALLVRALTHRSYAYENGGLPTNERLE
FLGDSVLGLVVTDTLYRAHPDLPEGQLAKLRAAVVNSRALAEVGRGLELGSFVRLGRGEE
GTGGRDKASILADTLEAVIGAVYLDQGLDAAGELVHRLFDPLIEKSSNLGAGLDWKTSLQ
ELTATEGLGVPEYLVSETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAEQQAAESAWRAI
RSAADERAKSARVAAEKVAQVTADAPSAATSGPATA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgccaaggcggacacaaacgccaagaaaaaggcggacaacacagcctcgtcc
cacacgcttctggaagggcggctcggctacaaggtcgagtccgcccttctggtgcgtgcg
ctgacccaccgttcctacgcgtacgagaacggcggtctgccgaccaacgagcgcctggag
ttcctcggggactccgtgctcggcctcgtggtcacggacacgctgtaccgcgcccacccc
gacctgcccgaaggccagctggccaagctgcgggccgcggtggtcaactcgcgtgcgctg
gcggaagtgggccgcggcctcgaactcggctccttcgtccggctcggccggggcgaggaa
ggcacgggaggcagggacaaggcatccatcctcgccgacaccctcgaagcggtgatcggc
gcggtctatctcgaccagggtctggacgcggcgggcgagctcgtccaccggctcttcgac
ccgctgatcgagaagtcatcgaatctgggcgcgggcctggactggaagaccagtctccag
gagctcaccgcgaccgaggggctcggcgttcccgagtacctggtctcggagaccggcccg
gaccacgagaagacctttactgctgccgcccgcgtcggaggcgtctcgtacggcaccggc
accggccgcagcaagaaggaggcggagcagcaggccgcggagtccgcgtggcgtgcgatc
cgctccgccgcggacgaacgcgcgaagtcggccagggtcgccgccgaaaaggtggcccag
gtgactgccgacgccccctcggccgcgacgagcggtccggccacggcctga
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