Streptomyces dengpaensis: C4B68_13660
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Entry
C4B68_13660 CDS
T06611
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sdx
Streptomyces dengpaensis
Pathway
sdx03420
Nucleotide excision repair
sdx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C4B68_13660
03430 Mismatch repair
C4B68_13660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdx03400
]
C4B68_13660
Enzymes [BR:
sdx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4B68_13660
DNA repair and recombination proteins [BR:
sdx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C4B68_13660
MMR (mismatch excision repair)
Other MMR factors
C4B68_13660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AVH56646
LinkDB
All DBs
Position
complement(3005509..3009141)
Genome browser
AA seq
1210 aa
AA seq
DB search
MWPPLSVGAASLSEVPARITDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTT
VMAARVVWLVGTGQVAPEQVLGLTFTNKAAGELAERVRKALIKAGVTDPDVIDPDNPPGE
PVISTYHAFAGRLLTDHGLRIGLEPTSRLLADATRYQLAARVLREAPGPYPALTRSFPDL
VGDLLTLDSELAEHLVRPEDLSAYDAELLRSLEGAKLTNADLRKVPEAAAARRELTELVG
RYRAAKRERDLLDFGDQIALSATLARTRPEVGEILRDEFRVVLLDEYQDTSVAQRVLLAG
LFGRGTGHPVTAVGDPCQAIYGWRGASVANLDDFPEHFARPDGRPATRQALSENRRSGGR
LLDLANGLAEPLRAMHAGVEALRPAPGAERDGLVRCALLRTHAEEIDWLADSIAHLVRTG
KAPGEIAVLCRTATDFAEIQRALVARDIPVEVVGLSGLLHLPEVADLVAVCEVLQDPGAN
ASLVRLLTGPRWRIGPRDLALLGRRARLLVSHARVGADDDPERRLAAAVEGVDPAEVISL
ADALDTFLEMPFEAERDDDGLPFSPDARVRFARLAAELRDLRRSLADPLMDVLHRVLAVT
GLEVELSASPHALAARRRETLSNFLDIAASFAAGDGEATLLAFLGFLRTAAQYEKGLDNA
LPGGENTVKVLTAHKSKGLEWDVVAVPGLVNGTFPSSQGREKWTAQGKVLPHELRGDADT
LPDIDAWDAKGIKAFHEAMKDHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKRPRGPS
DFLHALYEHCAAGHGEIEVWADEPLEDEENPALREAAADHAWPLPLDDAALARRRAAAET
VLAHLERAASHEDARPGAEGGRPAAAHDPASFDDPEWPPPPEDDEPTYEPHEPYEEDGSP
DYAESPSLPDNDASDWDAWTTDRPTLLAPAHHTRVPPAGDPDDAPPGVMIPHARRHPAEA
GLTPEEARTLASWDRDLDALTGELLHARASVTDVPLPSSLTASQLLRLAADPDGFAQELA
RPMPRPPQPAARRGTRFHAWVESRFEELRLPLLEPEELPGSEAEIADERDLEALKDAFER
TPYAHRTPYRVEAPFQLAIAGRVVRGRIDAVYREDDGEGTTYEIVDWKTNRGRTADPLQL
ALYRLAWAEQQGMPLESVKAAFLYVRSGEVVRPDDLADRAALERLLMGGPADPREEPPGE
PPDEHASVGG
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgtggcccccgctgtcagtgggcgccgctagcctctctgaggtgcccgcccgtatcacc
gatcccgagcagctcaaggagctcctcggcatcccgttcaccccggagcagacggcctgc
atcaccgcaccgcccgccccgcaggtgatcgtggccggagccggttcgggcaagaccacg
gtgatggcggcgcgcgtggtgtggctcgtcggcaccggacaggtcgcccccgagcaggtc
ctcggtctgacgttcacgaacaaggcggcgggcgaactcgccgagcgtgtccgcaaggcg
ctcatcaaggcgggtgtcaccgacccggacgtgatcgaccccgacaacccgccgggcgag
cccgtcatctccacgtaccacgccttcgcgggccgcctgctgaccgaccacgggctgcgc
atcgggctcgaaccgacgtcccgcctgctcgccgacgccacccgctaccagctcgccgcg
cgcgtgctgcgcgaggcaccggggccgtacccggcgctgacccgctccttcccggacctc
gtcggcgacctcctcacactcgactccgagctcgccgaacacctcgtacgccccgaggac
ctgagcgcgtacgacgccgaactgctgcgctccctggagggcgccaaactcaccaacgcc
gacctgcgcaaggtccccgaggcggccgcggcccggcgcgagctcaccgagctggtgggc
cgctaccgcgcggccaagcgcgagcgcgacctcctcgacttcggcgaccagatcgccctc
tcggccaccctggcccgcacccgccccgaggtcggcgagatcctgcgcgacgagttccgt
gttgtcctgctggacgagtaccaggacacctcggtggcccaacgcgtgctgctcgccggg
ctgttcggcaggggcaccggtcacccggtgaccgcggtcggcgacccctgccaggcgatc
tacggctggcgcggcgcctccgtcgccaacctcgacgacttccccgagcatttcgcgcgc
cccgacggccgccccgcgacccgccaggcgctcagtgagaaccgccgcagcggcggccgc
ctcctcgacctcgccaacggcctcgcggagcccctgcgcgccatgcacgcgggcgtggag
gcgctccgcccggcccccggagccgagcgcgacggcctggtccgctgcgcgctgctgcgc
acccacgccgaggagatcgactggctggccgactcgatcgcccatctcgtacgcaccggg
aaggcgcccggcgagatcgcggtcctgtgccgtacggccaccgacttcgccgagatccag
cgcgcgctcgtcgcccgtgacatccccgtcgaggtggtgggcctctccgggctgctgcac
cttcccgaggtcgccgatctcgtcgccgtctgcgaggtcctccaggaccccggcgccaac
gcctccttggtacggctgctcaccgggccgcgctggcggatcggcccccgcgacctcgcc
ctcctggggcggcgcgcccgccttctcgtgtcccacgcgcgcgtaggggccgacgacgac
ccggagcgccggctcgccgccgccgtcgagggagtcgatccggccgaggtgatttcgctc
gccgacgcgctcgacacgttcctggagatgcccttcgaggccgaacgggacgacgacggg
ctgcccttctcgccggacgcccgggtgcggttcgcgcggctcgcggcagagctgcgcgac
ctgcgccgctcgctcgcagacccgctgatggacgtcctgcaccgggtgctcgccgtcacg
ggcctggaagtcgagctctccgcatccccgcacgcactggccgcccgccgccgggagacc
ctgtcgaacttcctggacatcgccgcgtccttcgcggcgggcgacggcgaggcgacgctg
ctggccttcctcggcttcctgcgcaccgccgcgcagtacgagaagggcctcgacaacgcc
ctgcccggcggcgagaacaccgtcaaggtgctgaccgcgcacaagtccaagggcctggag
tgggacgtcgtcgcggtccccggcctcgtcaacggcaccttccccagcagccagggccgc
gagaaatggaccgcccagggcaaggtcctgccgcacgagctgcgcggcgacgccgacacg
ctgcccgacatcgacgcctgggacgccaagggcatcaaggccttccacgaggcaatgaag
gaccaccagcacaccgaggaactccgcctcggctacgtcaccttcacccgcccccgctcg
ctcctgctcggctccggccactggtggggcccctcccagaagcggccgcgcggcccctcg
gacttcctgcacgccctgtacgagcactgcgcggccggacacggagagatcgaggtctgg
gccgacgagccccttgaggacgaggagaaccccgcccttcgcgaggcggccgccgaccac
gcgtggccgctcccgctcgatgacgcggcgctcgcccgccgccgagcggccgcggagacc
gtgctcgcccacttggagcgggcggcgtcgcacgaggacgcccgcccgggggccgagggg
ggtcggcccgcggcagcgcacgacccggcctccttcgacgacccggaatggccacctcct
ccggaggacgacgaaccgacctacgagcctcatgagccctatgaagaggacggctctccg
gactacgccgagtcgcccagcctccccgacaacgacgcctccgactgggacgcgtggacc
acggaccggccgacgctcctcgcaccggcacatcacacgcgcgtgccgcccgccggggac
ccggacgacgccccgccaggggtgatgatcccgcacgcccgccggcaccccgccgaagcc
ggcctcaccccggaggaggcccgcaccctcgcctcctgggaccgcgacctggacgcgctc
accggagagctcctgcacgcccgcgcgagcgtcacggacgtacccctgccgtcgtcgctc
accgcgtcgcagctgctgcgcctggccgcggacccggacggcttcgctcaggagctggca
cgccccatgccgcgccccccgcagcccgccgcgcgccggggcacccgcttccacgcctgg
gtggagtcccgcttcgaagagctgcggctgcccctgctggagccggaggagctgcccggc
agcgaggccgagatcgccgacgagcgcgacctggaggccctcaaggacgccttcgaacgc
actccgtacgcgcaccgcaccccctaccgcgtcgaggcgcccttccagctcgccatcgcg
gggcgcgtcgtacgcgggcgtatcgacgccgtctacagggaggacgacggcgaggggacg
acgtacgagatcgtcgactggaagaccaaccgcggacgcaccgccgaccccctccagctc
gcgctctaccgcctcgcctgggccgagcagcagggaatgcccctggagtccgtcaaggcc
gcgttcctctacgtccgcagcggcgaggtcgtgcgaccggacgacctcgcggaccgtgcg
gcactggagcggctgctcatgggaggcccagcagacccgcgggaagagcctcccggggaa
ccgccggacgaacacgcctccgtgggcggatag
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