Streptomyces dengpaensis: C4B68_14110
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Entry
C4B68_14110 CDS
T06611
Name
(GenBank) ABC transporter
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sdx
Streptomyces dengpaensis
Pathway
sdx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4B68_14110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdx02000
]
C4B68_14110
Transporters [BR:
sdx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C4B68_14110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
MurB_C
DUF6491
MIB_HERC2
Motif
Other DBs
NCBI-ProteinID:
AVH56725
LinkDB
All DBs
Position
complement(3109391..3111187)
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AA seq
598 aa
AA seq
DB search
MSILTSRRARTAVVAVAAGALALAGCSSSNSGDNTDKSKNKEEAAAQSAAVKMGTAADST
GPAEEVPGAKPGGTIQVYEEDDFSHLDPAQIYVSDGGLLSKLIYRGLTTYKEDAKGGLTV
VGDLATDPGKISDGGKTWTYTLKDGIKDETGHVIDSTDVRHTIERLYDPIITDGPTYVQQ
WLSGSGTAYRKAYEGPYKGKHLPDTVLATPDDKTIVFKFKTAQPDLPQALAMAGYSIVPQ
KTDTKAKYDTKPVAVGPYKISELKAGKSVKLVKNTNWDAKTDPMRHQYVDGFNIDINHDD
EDQTKTLLADRGEAKNAIMMTGQVATTQVQKVVSDPAAMKRTIQGYAPYVWQLNFNMDRI
KDKKIRDAITYAMPATAVFKADGGAYGGEVANSLMSPTTPGYQKDYDPFGRAKKPNGDLE
KAKKLIEEAGAKGKKVVYAYANAPVRQQQAVLIENALEKIGLDVQKKEIDAATWYENVGK
VQNGFDLYMTGWGQDWPSANTVFPPLYDGTQIQDGASNYAHINDAHVNSEIARIQTITDA
AESAKAWTALNQYISEKVNPAAPIYYTKVFQIAGSNVGGLRYSTVTSYTDPTQVFLKS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcctcacttcccgcagagcgcgaaccgccgtcgtcgcggtcgcggccggcgcc
ctcgcgctggccggctgcagcagcagtaacagcggcgacaacacggacaagagcaagaac
aaggaagaggccgccgcccagtccgcggccgtgaagatgggtacggccgccgactcgacg
ggaccggccgaagaggtcccgggcgccaagcccggcggcacgatccaggtgtacgaggag
gacgacttctcgcacctcgacccggcccagatctacgtcagcgacggcggcctgctctcg
aagctcatctaccgcggcctgacgacgtacaaggaggacgccaagggcggcctcaccgtc
gtcggcgacctcgccaccgaccccggcaagatctcggacggcggcaagacctggacgtac
acgctgaaggacggcatcaaggacgagaccggtcatgtgatcgactcgaccgacgtccgc
cacaccatcgagcggctctacgacccgatcatcacggacggccccacctacgtccagcag
tggctgtcggggagcggcaccgcctaccgcaaggcgtacgagggcccctacaagggcaag
caccttccggacacggtcctcgcgacgcccgacgacaagacgatcgtcttcaagttcaag
accgcgcagcccgacctgccgcaggccctggccatggccggttactcgatcgtcccccag
aagacggacaccaaggcgaagtacgacaccaagccggtcgccgtcggcccgtacaagatc
tcggagctcaaggccggcaagagcgtgaagctggtcaagaacaccaactgggacgcgaag
accgacccgatgcgtcaccagtacgtcgacggcttcaacatcgacatcaaccacgacgac
gaggaccagaccaagacgctcctcgccgaccgcggcgaagccaagaacgccatcatgatg
accggtcaggtcgccaccacccaggtgcagaaggtcgtctccgaccccgcggcgatgaag
cgcacgatccagggctacgccccgtacgtgtggcagctgaacttcaacatggaccgcatc
aaggacaagaagatccgcgacgcgatcacctacgccatgccggccacggcggtcttcaag
gcggacggcggcgcgtacggcggtgaggtcgccaacagcctgatgtcgcccaccactccg
ggctaccagaaggactacgacccgttcggccgggccaagaagcccaacggcgacctcgag
aaggccaagaagctgatcgaggaggcgggcgccaagggcaagaaggtcgtctacgcctac
gccaacgccccggtccgccagcagcaggccgtcctcatcgagaatgcccttgaaaagatc
ggcctcgacgtccagaagaaggagatcgacgccgcgacctggtacgagaatgtcggcaag
gtccagaacggcttcgacctctacatgaccggctggggccaggactggccgtccgccaac
accgtcttcccgccgctgtacgacggcacgcagatccaggacggtgcgtcgaactacgcg
cacatcaacgacgcccacgtgaactcggagatcgcccggatccagacgatcacggacgcc
gccgagtccgcgaaggcctggaccgcgctcaaccagtacatcagcgagaaggtcaacccg
gcggcgccgatctactacaccaaggtgttccagatcgccggctccaacgtgggcggcctg
cgctactccacggtgaccagctacaccgacccgacccaggtcttcctcaagagctga
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