Streptomyces dengpaensis: C4B68_15640
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Entry
C4B68_15640 CDS
T06611
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sdx
Streptomyces dengpaensis
Pathway
sdx03420
Nucleotide excision repair
sdx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C4B68_15640 (pcrA)
03430 Mismatch repair
C4B68_15640 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdx03400
]
C4B68_15640 (pcrA)
Enzymes [BR:
sdx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C4B68_15640 (pcrA)
DNA repair and recombination proteins [BR:
sdx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C4B68_15640 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
C4B68_15640 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AVH56974
LinkDB
All DBs
Position
complement(3447542..3450031)
Genome browser
AA seq
829 aa
AA seq
DB search
MSSLFDDSFLADLKPSRGHEEEPPPPPEDDHVPESIPDDLFGGKFDVPPDRWGSPRSSGA
ESGGGYYRDGAHRPAVDPAALLDGLNENQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAY
LLAERHVHPGQILAITFTNKAAGEMKERVEHLVGPRANAMWVMTFHSACVRILRRESKKL
GFTSSFSIYDAADSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFANQAAD
GFEKTLAQAYALYQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVMVDEYQD
TNHAQYALVRELVGPADSDPGELCVVGDADQSIYAFRGATIRNILQFEEDYTDATTILLE
QNYRSTQTILSAANAVIERNESRRPKNLWTNAGAGSNITGYVADTEHDEAQFVADEIDRL
TDAGEARAGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLS
NPEDSVPLRRILNVPKRGIGERAEAMIDALSQREKISFPQALRRVDEAYGMAARSTNAVK
RFNTLMEDLRTIVDSGAGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALE
FEQESGEGEAAGSLSDFLERVALVADSDQIPDEEDGNGVITLMTLHTAKGLEFPVVFLTG
MEDGVFPHMRALGQVKELEEERRLAYVGITRARERLYLTRSSMRSAWGQPSYNPPSRFLE
EIPETHMDWKRTGATAPMPSGPASGVAASLSSSRARSAASGASGFATRRGVSEKPVVSLA
VGDRVTHDQFGLGTVVGVKGTGANAEATVDFGEAKPKRLLLRYAPVEKL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgatgacagcttcctggcggacctcaagccctcgcgggggcatgag
gaggagcccccgccgccgcccgaggacgatcacgtaccggagtcgattccggacgatctg
ttcggcgggaagttcgacgtgccgccggaccgatgggggtccccccgctcgagcggagcc
gagagtgggggagggtactaccgcgacggcgcccaccggcccgccgtggacccggcggcg
ctcctggacgggctgaacgagaaccagcgcgcggccgtggtgcactccggctccccgctg
ctcatcgtggccggcgcgggctccggcaagacgcgcgtgctcacgcaccggatcgcgtat
ctgctggccgagcggcatgtccacccgggtcagatcctcgcgatcaccttcaccaacaag
gccgcgggcgagatgaaggagcgcgtcgagcaccttgtgggcccgcgcgccaacgcgatg
tgggtgatgaccttccacagcgcgtgcgtccggatcctgcgccgcgagagcaagaagctc
ggcttcacgtcctccttctcgatctacgacgccgccgactccaagcggctcatggcgctc
gtatgccgtgatctggatctggaccccaagcgcttcccgcccaagtccttcagcgccaag
atctccaatctgaagaacgagctgatcgacgaggaggacttcgcgaaccaggccgccgac
ggtttcgagaagaccctcgcccaggcctacgcgctgtaccagtcccgcctgcgcgaggcc
aacgcgctcgacttcgacgacctgatcatgacgacggtcaacctgctccgcgccttcccg
gacgtcgccgagcactaccgccgccgtttccgccacgtcatggtcgacgagtaccaggac
acgaaccacgcgcagtacgcgctggtcagggagctggtggggcccgccgacagcgatccc
ggcgagctctgcgtcgtgggtgacgccgaccagtcgatctacgccttccgcggcgccacc
atccgtaacatcctccagttcgaggaggactacacggacgcgacgacgatcctgctcgag
cagaactaccgctccacgcagacgatcctgtccgcggccaacgccgtcatcgagcgcaac
gaatcccgccgccccaagaacctgtggaccaacgcgggcgcgggttcgaacatcacgggc
tatgtcgccgacaccgagcacgacgaagcgcagttcgtcgccgacgagatagaccgtctc
accgacgcgggcgaggccagggcgggcgacgtcgccgtcttctaccgtacgaacgcgcag
tcccgtgtcttcgaagaggtcttcatccgcgtcggcctgccctacaaggtcgtcggcggc
gtgcgcttctacgagcgcaaggaggtccgggacgtcctggcgtacctcagggtgctgtcc
aaccccgaggactcggtcccgctgcgccggattctgaacgtgcccaagcgcggcatcggc
gagcgcgcggaagcgatgatcgacgcgctgtcgcagcgcgagaagatcagcttcccgcaa
gccctgcgccgcgtcgacgaggcgtacgggatggcggcgcgctcgacgaacgcggtcaag
cggttcaacacgctgatggaggacctgcggacgatcgtggattcgggcgcgggcccggcc
accgtcctggaggccgtcctcgaacgcaccggctacctcgccgagttgcaggcctcgacc
gacccgcaggacgagacccgtatcgagaacctccaggaactcgccgccgtggccctggag
ttcgagcaggagtccggtgagggcgaggccgcgggatcgctctccgacttcctggagcgg
gtcgcgctggtcgccgactccgaccagatcccggacgaggaggacggcaacggcgtcatc
accctgatgaccctgcacaccgccaagggcctcgaattcccggtggtcttcctgaccggc
atggaggacggcgtcttcccgcacatgcgcgcgctgggacaggtgaaggagctggaggag
gagcggcgcctggcgtacgtgggcatcacgcgcgcgcgggagcggctgtatctgacccgg
tcctccatgcgcagcgcgtgggggcagccgtcgtacaacccgccgtcgcggttcctggag
gagatcccggagacccacatggactggaagcgcacgggtgcgacggctcccatgccgtcc
ggtccggcctcgggtgtcgcggcgtctctgtcgtcctcgcgcgcgcggtcggccgcctcg
ggtgcctccgggttcgcgacgcgccgcggtgtctccgagaagccggtggtctcgctggcc
gtcggcgaccgggtcacgcacgaccagttcggcctcggcaccgtcgtcggcgtgaagggg
acgggtgcgaacgcggaggcgacggtcgacttcggagaggcgaagccgaagcggctgctg
ctgcggtacgcgccggtggagaagctgtag
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