Streptomyces dengpaensis: C4B68_16085
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Entry
C4B68_16085 CDS
T06611
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sdx
Streptomyces dengpaensis
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdx03016
]
C4B68_16085
Enzymes [BR:
sdx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
C4B68_16085
Transfer RNA biogenesis [BR:
sdx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C4B68_16085
Prokaryotic type
C4B68_16085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AVH57045
UniProt:
A0ABM6SQR7
LinkDB
All DBs
Position
complement(3551048..3551914)
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AA seq
288 aa
AA seq
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MSDEVQPGFVRVRLELSYDGTAFHGWAKQAGERRTVQAEIEDALRTVTRSGDTAYELTVA
GRTDAGVHARGQVAHVDLPLEVWGEHRGKLLKRLAGRLPKDVRVWALREAPSGFNARFSA
IWRRYAYRVTDNPGGVDPLLRGHVLWHDWPLDVDAMNEAAGRLLGEHDFAAYCKRREGAT
TIRTLQELSLVRGEDGIITATVRADAFCHNMVRSLIGALLFVGDGHRGTDWPGKVLAAGV
RDSAVHVVRPHGLTLEEVGYPADELLAARSKEARNKRSLPGAAGCAAC
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacgaagtacagcccggttttgtgcgtgtgcgtctggaactgtcctacgacggg
accgcgttccatgggtgggcgaagcaggccggtgagcgtaggaccgtgcaggcggagatc
gaggacgcgctacggacggtgacgcggtccggggacaccgcgtacgagctgaccgtggcc
gggcggaccgatgccggagtgcatgcacgcgggcaggtggcgcatgttgatctgcctctg
gaggtctggggcgagcaccgcgggaagctgctcaagcggcttgccgggcggctgcccaag
gatgtgcgggtgtgggctctcagggaggcgcccagcggtttcaatgcccgcttctccgcg
atctggcggcggtacgcctatcgcgtcaccgacaaccccggtggcgtcgatccgctgctg
cgcggtcacgtcctctggcacgactggcccctcgacgtggacgccatgaacgaggcagca
gggcggctcctgggggagcacgacttcgccgcgtactgcaagcggcgcgagggtgcgacc
accattcgtacgctccaggagctgagcctggtgcggggtgaggacgggatcatcaccgcg
accgtgcgggccgatgccttctgccacaacatggtgcggtcgctgatcggtgcgctgttg
ttcgtgggggacgggcatcgcgggaccgactggcccgggaaggtgctggccgccggtgtg
cgtgactccgccgtccatgtcgtacggccgcacgggctgacgctcgaggaggtcgggtat
cccgccgacgagttgctggccgcgcggagcaaggaggcgcggaacaagcggtcgctgccc
ggggcagcagggtgtgcagcctgttaa
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