Streptomyces dengpaensis: C4B68_20235
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Entry
C4B68_20235 CDS
T06611
Name
(GenBank) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
sdx
Streptomyces dengpaensis
Pathway
sdx00260
Glycine, serine and threonine metabolism
sdx00270
Cysteine and methionine metabolism
sdx00450
Selenocompound metabolism
sdx00670
One carbon pool by folate
sdx01100
Metabolic pathways
sdx01110
Biosynthesis of secondary metabolites
sdx01230
Biosynthesis of amino acids
Module
sdx_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C4B68_20235
00270 Cysteine and methionine metabolism
C4B68_20235
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
C4B68_20235
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
C4B68_20235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdx04147
]
C4B68_20235
Enzymes [BR:
sdx01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
C4B68_20235
Exosome [BR:
sdx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
C4B68_20235
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
DUF411
Motif
Other DBs
NCBI-ProteinID:
AVH57715
LinkDB
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Position
complement(4395373..4396518)
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AA seq
381 aa
AA seq
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MTSGDFVTASGDGTRAVRAGLPEPVKYEPTLPGPVFAAHFHLPGEPTGPYTYGRDENPTW
TLLERAIGELEAPGQEGVETLAFPSGMAAISAVLFSQLRAGDIVVLPDDGYQVLPLVREQ
LTAYGIQVRTAPTGGDAQLEVLDGAKLLWIETPSNPGLDVCDIRRLVAAAHAQGTLVAVD
NTLATPLGQRPLELGADFSVASGTKMLTGHGDLLLGYVAAREAALMTPVRRWRKIVGAIP
GPMEAWLAHRSLATLQLRADRQTANALAIAEALRERPEATGLRYPGLPDDPSHKIASQQM
RRFGCVVSFTLPTRARADRFLEALRLVDDATSFGGVRSTAERRGRWGGDAVPEGFVRLSA
GAEDPEDLIADILRALDESAG
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaggggatttcgtcacggccagcggtgacggcacacgcgcggttcgggccgga
ttgcccgaacccgtcaagtacgagccgactctcccgggcccggtcttcgccgcgcacttc
cacctgccgggcgagcccaccggtccgtacacctacggtcgtgacgagaacccgacgtgg
acgctcctggagcgcgccatcggcgagctggaggcccccggacaggaaggcgtcgaaacg
ctcgccttcccgtcgggcatggccgccatctcggcggtgctcttctcccagctgcgcgcc
ggcgacatcgtggtcctgcccgacgacggctatcaggtgctgccgctcgtgcgtgagcag
ctgaccgcgtacggcatccaggtgcgcaccgccccgaccggcggcgacgcccagctggag
gtgctcgacggcgccaagctgctgtggatcgagaccccctcgaacccgggcctcgacgtg
tgcgacatacgacggctcgtcgccgcggcacacgcacaaggcaccctcgtcgccgtcgac
aacaccctggcgaccccgctcggacagcgcccgctggagctgggcgccgacttctccgtg
gccagcggcaccaagatgctcactgggcacggcgacctcctcctgggatacgtcgccgca
cgtgaggccgctctgatgactcccgtacgacgctggcggaagatcgtcggcgcgatcccc
ggcccgatggaggcctggctggcccaccgctcgctcgccacgctccagctccgcgccgac
cgccagaccgccaacgccctggcaatcgccgaggcactgcgggagcggccggaggcgacc
gggctgcgctatccgggactgcccgacgacccctctcacaagatcgcttcgcagcagatg
cggcgcttcgggtgcgtggtgtccttcacgctgcccacgcgcgcccgtgccgaccgcttc
ctcgaagcgctgcgtctggtggacgacgcgacgagcttcggcggcgtccggtccacggcc
gaacggcgcggccggtggggcggggacgcggtgccggaaggcttcgtccgcctctcggcc
ggtgccgaggatcccgaggacctgatcgcggacattctgcgggcactcgacgaatcggcg
gggtga
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