Streptomyces dengpaensis: C4B68_20555
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Entry
C4B68_20555 CDS
T06611
Name
(GenBank) PAS domain S-box protein
Organism
sdx
Streptomyces dengpaensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Diguanyl_cycl_sensor
Response_reg
PAS_7
HisKA
Motif
Other DBs
NCBI-ProteinID:
AVH57765
UniProt:
A0ABM6STM7
LinkDB
All DBs
Position
complement(4464201..4468406)
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AA seq
1401 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDALVLVNANGTVVNANTIALEAFEAPGTALVGRGLLDLLP
QFDSRLIPGSMRRPETIDQSGRTKPTRMVARRTDGTEFPVEVTSANLENGQQAYDNYGYT
ADELLMLVVRDLSGAVDTEAELARSQRQTEMILRAASEGVVGTDTDGRVVLVNPAAAQIL
GYRASDLGGQELHALILHSRADGEPFPYEESPLADTLRSGRKHRVRGQVLWSKSGDKVPV
DLTTAPVRDGDQLVGAVMTFTDRRPYDTLVEEKDAEATQHAEELARIGEEHAGELAALRE
KHTAELAEVRERHEEELAAGDERYAALGEREKDRYEALTARHEQLLAVLGQSLRGPLDQL
RAELSKLAADDAGQLWPEANQVLHHLAAGYSRITTLVDNVLGYQRLDSGAEEISRTKVML
DAVVAAGVDGAVELIGPGRVQFAVHAPPIEAEVDPQRLANALAHLIADVAGVDATGNAPV
SAGGYMDNTVVVAAAQRGESVRIEVRGPYAGGDPVHEPIVRGIVRAHGGVLQTHEVPGMS
GSAFVLEVPIGGGAGAVPPPNTENTTGAEVALPEQASQQGGGRRRARRSSVDAFLESEVS
GKPGTASAETGAAAPTGRRRRRAADEQVTGEATVPAQASAVEGPGGASGGTGRRRGRPSP
VEGTGESAGEGSGEGAAGTAAGVTGGVSEGAVVTAAEHASGTAAVGSGLGGTVPPQGMPV
PSGRRARQDGEQHALPPALPAAASVTPAADTAGTPVAPGAPDAGTSSDAAQPSGRRRRAL
AAAAERAAAQEAGARPVFALPPAEADRSPGYAQAQAQAQTQTQPVDSGGLGHEQADDGRH
DALLRDPADDHTPPQPHPVSGPTGRRRARRAPDQPDVAGTPAQAVPASGIALPGQAVPAQ
GVPAQGVPGAAAAGQTLPTQAPQAPQAPQAPQTTQAAAASQAASAAGTPAPIPATAPQPW
PNANAKANPNDTSGAGTRTPVPPATATQPTPAPAAPLPPELPAKPRAAQPLPAEAAGPID
PNSTQGRAISVRTLGQGVPFARQPSANQPVPNQPGGPQAAQPQSATPPPHQTNGSGRRRK
LGTRPEPGAERPETGARPHPQAGQTATAPGPRLPGATEGAGRSYAIGAPDENAAEGPEPL
DGPGGAVEVADQPLPQPLDDELPPEPLDNPRRLLVWPAPDVTTQQALSDRGYRPVIVHSR
EEVDAQIAAFPAALFVDPLTGPITRTALQSLRQAAVAAEVPVLVTAGLGQATREAAYGAD
PAVLLKALAPRDSEQHPPRVLLIEEHAEIALALTATLERRGMQVARASTDTDAVTLASQM
RPNLVVMDLLQVRPRQAGIVDWLRANGQLNRTPLVVYTAAVDPAERPRLAAGETVLFLAE
RSTSAEVQDRIVDLLARIGTN
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgcagccatactggatgcgctgccc
gatgcgttggtactggtcaacgccaatggcaccgtcgtcaacgccaacaccatcgccctg
gaggccttcgaggccccgggcacggctctggtgggccgggggctgctcgatctgctgccg
cagttcgactcgcggctgatcccgggttccatgcggcggcccgagaccatcgaccagagc
gggcggaccaagccgaccaggatggtcgcgcggcgaaccgacgggaccgagttcccggtc
gaagtcaccagtgcgaatctcgagaacggccaacaggcctacgacaactacggatacacc
gccgacgagctgctcatgctcgtcgtacgcgatctgtcgggcgccgtcgacaccgaagcc
gaactcgcgcgttcgcaacggcagaccgagatgatcctgcgggccgcgtccgagggtgtg
gtggggaccgacacggacggacgcgtcgttctcgtcaatcccgccgccgctcagatactc
ggttatcgggccagcgatctcggcggccaggaactgcacgcgctcatccttcactcgcgc
gcggacggcgagcccttcccgtacgaggagtcaccgctcgccgacaccctgcgctccggg
cgcaagcaccgggtgcgcgggcaggtgctgtggtcgaagtccggggacaaggtgccggtc
gatctgacgaccgcgccggtgcgggacggggaccaactcgtcggcgccgtgatgaccttc
accgaccggcggccctacgacaccctcgtcgaggagaaggacgccgaggcgacccagcac
gcggaagagctcgcccgcatcggcgaggagcacgccggggaactggcggcgctgcgtgag
aagcacacggccgagctggccgaggtgcgcgagcggcacgaggaggaactcgccgccggt
gacgagcggtacgccgcgctcggcgagcgcgagaaggaccggtacgaggcgctgaccgcc
cggcacgagcagctgctcgccgtgctcggccagtccctgcgcgggcccctcgaccagctg
cgcgccgaactctccaagctcgccgccgacgacgccggacagctgtggcccgaggccaac
caggtgctccaccacctcgcggccggctactcgcggatcacgactctggtcgacaacgtc
ctcggttatcagcggctcgactccggggccgaggagatctcccgtacgaaggtgatgctc
gacgcggtcgtcgcggccggtgtcgacggcgcggtcgagctgatcgggccgggccgggtg
cagttcgccgtgcacgcgccgcccatcgaggccgaggtcgacccgcagcggctcgcgaac
gccctcgcgcatctcatcgcggacgtcgccggggtcgacgcgaccggcaacgcgccggtg
tcggcgggcggttacatggacaacaccgtcgtcgtggcggcggcgcagcgcggcgagagc
gtccgtatcgaggtgcgcggcccgtacgccgggggagacccggtgcacgagccgatcgtg
cgcgggatcgtgcgcgcgcacggtggtgtgctgcagacgcacgaggtgccggggatgagc
ggcagcgcgttcgtgctggaggtgccgatcgggggtggcgccggggcggttccgccgccg
aacaccgagaacaccacgggtgccgaagtcgcgcttcccgagcaggcctcgcagcagggc
ggtggcaggcggcgagcgcggcggtcctccgtggacgccttcctggagagcgaggtgtcg
gggaagcccgggaccgcctccgccgagaccggtgcggccgctcccacggggcggcgtcgg
cggcgtgcggcggatgagcaggtcacgggcgaggcgaccgttccggcgcaggcgtccgcg
gtcgagggccctggcggcgcctccggtggcaccgggcggcggcgcgggcgcccgagtccg
gtcgaaggcacgggcgagagcgcgggcgaaggcagcggcgaaggcgcggctggtacggcc
gccggcgtgaccggtggcgtctccgagggcgcggtcgtcacggcggccgagcacgcgtcg
gggacggcggccgtggggtcggggctgggcgggacggttcctccgcaggggatgcccgtg
ccctccggccgacgcgcgcggcaggacggcgaacagcacgcgctgccgcccgcgctgccc
gcggcggcctcggtcacgcccgccgccgatacggctggtacgcccgtcgcaccgggtgcg
ccggacgccggcacttcctcggacgcggcgcagccgagcggacggcgtcggcgtgcgctg
gccgccgcggccgagcgtgctgccgcgcaggaggccggcgcccgtccggtgttcgcactg
ccgcccgccgaggcggaccgctcacccgggtacgcccaggcccaggctcaagcccagacc
cagacccagccggtcgacagcggcggcctcggtcacgagcaggccgacgacggccgtcat
gacgcgctgctgcgcgacccggccgacgatcacactccgccgcagccgcaccccgtttcc
ggcccgacagggcggcgacgtgctcgccgtgctccggatcagccggacgtggcggggacg
ccggcacaggcggttccggcatcggggattgcccttcccggacaggcggttccggcacag
ggcgttcccgcgcagggcgttccgggtgcggccgctgctgggcagacgcttcccacacag
gcaccgcaagcaccacaggccccgcaagcaccgcagacaacccaggccgctgccgcctcc
caggccgcctcagcggccggcaccccggcgccgatcccggctacggccccgcagccgtgg
ccgaacgcgaacgcgaaggccaaccccaacgacacctcaggcgcaggcacccgaaccccc
gtccccccggcaacagccacccagccaacccccgcgccggccgccccccttccccccgag
ctccccgcgaagccgcgcgccgctcagcctctgcccgccgaggccgcgggcccgatcgac
cccaactcgacgcagggccgcgcgatcagcgtgcgcacgctcggccagggcgtcccgttc
gcccggcagccttcagcgaaccagccggtgccgaaccagccgggcggcccccaggccgcg
cagccccagtccgccacgcctcccccgcaccagaccaacggctcgggccgtcgccgcaag
ctcggtacgcgccccgagcccggcgccgagcgcccggagacgggggcccgtccgcacccg
caggccgggcagacggccaccgcgcctgggccccggctgcccggagccaccgagggcgcc
ggacggtcgtacgccataggagcaccggacgagaacgccgccgagggccccgagccgctc
gacggtcccggcggtgccgtcgaggtcgccgaccagccgctgccgcagcccctggacgac
gaactgcccccggagccgctggacaacccgcggcgcctgctcgtgtggcccgcgcccgac
gtcaccacccagcaggcgctgagcgaccgcggctaccggcccgtcatcgtgcactcgcgc
gaggaggtcgacgcgcagatcgccgccttcccggccgcgctcttcgtcgacccgctgacc
gggccgatcacccgcacggcgctccagtcgctgcgccaggccgccgtcgccgccgaggtg
cccgtcctcgtgacggcgggactcggccaggcgacgcgcgaggcggcgtacggcgccgat
cccgccgtactcctgaaggccctggcgccccgggactccgagcagcacccgccgcgcgtg
ctgctcatcgaggagcacgcggagatcgcgctggcgctgaccgcgacgctcgagcggcgc
gggatgcaggtcgcgcgggcgtccaccgacacggacgccgtcacactggcctcgcagatg
cggccgaacctggtcgtgatggacctgttgcaggtacggccccggcaggccggaatcgtg
gactggctccgcgcgaacggccagttgaaccgcacgccgctcgtcgtctacaccgcagcc
gtcgacccggccgaacggccgcgcctggccgcgggggagacggtcctgttcctcgccgag
cgctcgacgagcgccgaggtgcaggaccggatcgtcgacctgctggcgcggatcggcacc
aactag
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