Streptomyces dengpaensis: C4B68_20855
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Entry
C4B68_20855 CDS
T06611
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sdx
Streptomyces dengpaensis
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdx03021
]
C4B68_20855
Transcription machinery [BR:
sdx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C4B68_20855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
MarR
HTH_24
HTH_31
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AVH57813
LinkDB
All DBs
Position
complement(4513436..4514332)
Genome browser
AA seq
298 aa
AA seq
DB search
MSADQGSSKVLTLTKSESAPEAHDALHDVPAAEAPEAVLAPESSGAIDTRTLSRSLFLRL
AALGENSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCE
RGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVTE
LAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDTALEGVEYRES
LKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLRDGLISD
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcacgctcacgaagagcgagtcagcgccc
gaggcgcacgacgcgcttcacgatgtccctgccgccgaggccccggaagccgtcctggcc
cccgagtcctccggcgccatcgacacccgcaccctgtcccgctccctcttcctgcggctc
gccgcactcggcgagaacagcccggagcgcgcctacgtccgggacaccctcatcgagctc
aacctcccgctcgtccggtacgcggccgcgcgcttccgctcccgcaacgagccgatggag
gacatcgtccaggtcggcacgatcggcctgatcaaggcgatcgaccgcttcgactgcgaa
cgcggcgtcgagttcccgacgttcgcgatgccgacggtcgtcggcgagatcaagcggttc
ttccgcgacacgtcgtggtccgtgcgggtacccaggcggctgcaggagctgcggctcgcc
ctcaccaaggccagcgacgagctctcgcagaagctcgaccgctccccgacggtcaccgaa
ctcgccgccgtcctcggcgtgtccgaggaggacgtggtcgacggcctcgcggtcggcaac
gcgtacacggcgtcgtcgctcgactcccccgcccccgaggacgacggcggcgagggctcc
ctcgcggaccgcctgggctacgaggacaccgccctggagggcgtcgagtaccgcgagtcc
ctcaagccgctcctggccaaactcccgccccgcgagcgccggatcatcatgctccgcttc
ttcgccaacatgacccagtcgcagatcggcgaggaggtcggcatctcgcagatgcacgtc
tcccggctgctgacccgcactctggcgcagctgcgcgacggcctcatctccgactga
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