Streptomyces dengpaensis: C4B68_20860
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Entry
C4B68_20860 CDS
T06611
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sdx
Streptomyces dengpaensis
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdx03021
]
C4B68_20860
Transcription machinery [BR:
sdx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C4B68_20860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
MarR_2
HTH_Crp_2
NirdL-like_HTH
MarR
HTH_3
DUF134
DUF7343
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AVH57814
LinkDB
All DBs
Position
complement(4514577..4515434)
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AA seq
285 aa
AA seq
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MALTVSASTAPPQEGAPAPAEAPPQEVAPERRRGADTRALTQVLFGQLKTLEPGTPEHNR
VRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPT
VVGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDLTTAFGRSPSTAEIAERLRITEDEV
LSCIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALDGVEHRDLVRHLLVQLPEREQR
ILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFARLRSANRIDA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtggcgttgaccgtgtcggccagtactgcgccgccccaggagggagccccggctccggcc
gaggccccgccccaggaagtcgcgccggagcggcgccgcggcgctgatacccgggccctc
acgcaggtgctcttcgggcagctcaagacgctggagccgggcacaccggagcacaaccgc
gtacgcggggcgctcatcgaggccaacctccccctcgtccggtacgcggccgcccgcttc
cgcagccgcaacgaacccatggaggacgtcgtccaggtcggcacgatcggcctgatcaac
gcgatcgaccgcttcgaccccgaccggggcgtgcagttcccgaccttcgcgatgcccacc
gtcgtcggcgagatcaagcggtacttccgcgacaacgtccgcaccgtccacgtaccgcgc
cggctgcacgagctgtgggtgcaggtgaacagcgcgacggaggacctgacgacggcgttc
gggcgctcgcccagcaccgccgagatcgccgagcgactgcgcatcaccgaggacgaggtg
ctgtcctgcatcgaggcgggccgttcgtatcacgccacctccctcgaggcggcccaggag
ggcgacggactgccgggcctgctcgaccgcctcggctacgaggaccccgcactcgacggc
gtcgaacaccgcgacctcgtacgccatctcctcgtacaactgcccgagcgcgaacagcgc
atcctgctcctgcgctactacagcaatctgacgcagtcacagatcagcgcggaactggga
gtctcccagatgcacgtgtcaaggcttctggcccgtagcttcgcgcgtcttcgatccgca
aacaggatcgatgcgtaa
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