Streptomyces dengpaensis: C4B68_23900
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Entry
C4B68_23900 CDS
T06611
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sdx
Streptomyces dengpaensis
Pathway
sdx00300
Lysine biosynthesis
sdx00470
D-Amino acid metabolism
sdx01100
Metabolic pathways
sdx01110
Biosynthesis of secondary metabolites
sdx01120
Microbial metabolism in diverse environments
sdx01230
Biosynthesis of amino acids
Module
sdx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C4B68_23900
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C4B68_23900
Enzymes [BR:
sdx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C4B68_23900
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AVH58302
UniProt:
A0ABN5I5G0
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All DBs
Position
complement(5158191..5159648)
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AA seq
485 aa
AA seq
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MSSGGAGASGGAMSSGGASAAGGAGAAGSTEVSGSTGGDDSDRVLRRDEAVRAAVEQGLL
GPGAPVVALLDVPGIRASATALRAAFDAVTAPDTPVLHAFAVKATPLVPVLRLLYEQGIG
AEVASPGELALARAAGIPPAHTVLDSPAKTPAELREALASGIAVNADNPQELDRIDAIVR
SAATGSPIGIRVNPQVGGGSIEALSTATATSKFGVALRDEGAREWIVGAYADRPWLTRLH
THTGSQGIPLSLMAQGVAETYALAEEINRRLGRRQVDTIDIGGGLPVNFGSDATAPTYAQ
YARLLAEVVPGLFDGRYGLVTEFGRSLLAKHGTVIARVEYAKSAGGRPVAVTHAGAQVAA
RTVYAPVTWPLRIAAYDAKGRPKAGPDVIQDVAGPACFAGDLLAEGRALPLLEQGDYAAA
LDTGAYYFAHHYAYNSLARPAIYGFAPAPEGGQHEVRFAVVREQQTLDEIVAESGGAQPS
ALTGL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcggcgcgggagcctccggcggcgcgatgtcatcgggtggcgcgagcgct
gccggcggcgcgggggctgccggcagcacggaggtttcgggtagcacgggcggcgacgac
tccgatcgtgtcctccggcgtgacgaagccgtccgggccgccgtggagcaggggctcctc
gggccgggagcaccggtcgtcgccctgctcgacgtccccggcatccgggcctcggcgacc
gcgctgcgggcggccttcgacgcggtgaccgccccggacacccccgtactgcacgccttc
gcggtgaaggcgaccccgctcgtacccgtgctgcggctgctgtacgagcagggcatcggc
gcggaggtggcgagccccggcgaactcgccctcgcgcgggcggccgggatcccgccggcg
cacaccgtgctcgactcccccgcgaagacgcccgcggagctgcgcgaggcgctggcgtcg
ggcatcgcggtcaacgcggacaatcctcaggagctggaccgcatcgacgcgatcgtgcgg
tccgcggccaccggctcgccgatcgggatccgggtgaacccgcaggtcggcggtggttcg
atcgaggcgctgtccaccgcgacggcgacgtccaagttcggggtcgcgctgcgcgacgag
ggtgcccgcgagtggatcgtcggggcgtacgccgaccgcccgtggctgacccggctgcac
acgcacaccggttcgcagggcatcccgctctcgctgatggcgcagggcgtggcggagacg
tacgcgctggccgaggagatcaaccggcgcctcgggcggcggcaggtcgacacgatcgac
atcggcggcgggctgccggtcaacttcggttccgacgcgacggccccgacgtacgcgcag
tacgcgcggctgctcgccgaggtggtgcccgggctcttcgacgggcggtacgggctggtc
accgagttcgggcggtcgctgctcgccaagcacgggacggtgatcgcccgggtcgagtac
gccaagtccgccgggggccggccggtcgcggtcacccacgccggggcccaggtggcggcc
cgcacggtgtacgcgcccgtgacctggccgctgcggatcgccgcgtacgacgcgaaaggc
cgccccaaggcgggaccggacgtcatccaggacgtagcgggccccgcctgcttcgcgggc
gacctgctcgccgagggacgcgcgctgcccctgctcgaacagggcgactacgcggccgcc
ctggacacaggtgcgtactacttcgcccaccactacgcctacaactccctagcccgcccg
gccatttacggcttcgcgccggccccggagggcgggcagcacgaggtgcgcttcgcggtc
gtacgggagcaacagaccctcgacgagatcgtcgccgagtcgggcggggcacagccgtcg
gcgctgacggggctttag
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