KEGG   Streptomyces dengpaensis: C4B68_27065
Entry
C4B68_27065       CDS       T06611                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
sdx  Streptomyces dengpaensis
Brite
KEGG Orthology (KO) [BR:sdx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sdx03016]
    C4B68_27065
Enzymes [BR:sdx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     C4B68_27065
Transfer RNA biogenesis [BR:sdx03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    C4B68_27065
 Prokaryotic type
    C4B68_27065
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1 Lactamase_B_4
Other DBs
NCBI-ProteinID: AVH58816
LinkDB
Position
5849463..5850368
AA seq 301 aa
MSVRELVVLGTASQVPTRHRNHNGYLLRWDGEGLLFDPGEGTQRQMLRAGVAAHDLHRIC
VTHFHGDHSLGLAGVIQRINLDRVPHEVTAHYPRSGQRFFDRLRYATAYRETVELVEAPV
EADGVLAATPAYTLEARRLSHPVESFGYRLVEPDGRRMLPERLAERGIKGPDVGRLQREG
SLGGVTLDDVSEVRRGQRFAFVMDTRMCEGVGALAEGCDLLVIESTFLVEDELLAVEHGH
LTAGQAGRVAKEAGVRHLVLTHFSQRYSEPEAFERQARAAGFEGELTVAHDLVRVPVPKR
R
NT seq 906 nt   +upstreamnt  +downstreamnt
ttgtccgtacgtgaattggtggtcctcggcaccgccagccaggtcccgacccggcaccgc
aaccacaacggctatctgctgcgctgggacggcgagggactgctcttcgaccccggcgag
ggcacgcagcgccagatgctgcgtgccggggtcgccgcgcacgacctgcaccggatctgt
gtcacccacttccacggcgaccactcgctcggactcgccggcgtgatccagcgcatcaac
ctcgaccgtgtaccgcacgaggtgaccgcgcactacccgcgctccgggcagcggttcttc
gaccggctgcgctatgccacggcctaccgcgagaccgtcgagctggtggaagcgccggtc
gaggcggacggcgtgctcgcggcgacgcccgcgtacaccctggaggcccgcaggctctcc
caccccgtcgagtccttcggataccggctggtcgagccggacgggcggcggatgctgccg
gagcggctcgccgagcggggcatcaaggggcccgacgtcgggcggctgcagcgggagggc
tcgctgggcggggtcaccctcgacgacgtcagcgaggtgcggcgcggtcagcggttcgcg
ttcgtcatggacacccggatgtgcgagggggtgggcgctctcgcggaggggtgcgatctg
ctcgtcatcgagtccaccttcctcgtcgaggacgagctactcgccgtcgagcacgggcat
ttgaccgccggtcaggcgggacgggtggctaaggaagcgggcgtacggcatctcgtgctc
acccacttcagtcagcgttactccgagcccgaagccttcgagcggcaggcccgcgccgcc
gggttcgagggggagctgacggtggcgcacgatctggtcagggtgccggttccgaagcgt
cgctga

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