Streptomyces dengpaensis: C4B68_29085
Help
Entry
C4B68_29085 CDS
T06611
Name
(GenBank) pullulanase-type alpha-1,6-glucosidase
Organism
sdx
Streptomyces dengpaensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
PUD
Pullul_strch_C
Pullulanase_N2
Alpha-amylase_C
CBM_48
DUF5696
Motif
Other DBs
NCBI-ProteinID:
AVH61497
LinkDB
All DBs
Position
6309318..6314696
Genome browser
AA seq
1792 aa
AA seq
DB search
MPRGPARRRLRLRAAVLAAALAVSLAQPLAARAETPPAPPSDAKLAAEPARHDATREQFY
FVLPDRFANGDTSNDRGGLTGSRLATGYDPTDKGFYQGGDLKGLTKRLDYIKGLGTTAIW
MAPIFKNRPVQGTGKDASAGYHGYWITDFTQVDPHFGTNKDLETLISKAHAKGMKVFFDV
ITNHTADVVDYEEKSYGYLSKGAFPYLTKDGRPFDDADYADGAGTFPAVDADSFPRTPAV
PAAQKDAKVPSWLNDPTMYHNRGDSTFAGESSTNGDFSGLDDLWTERPEVVEGMEKIYER
WVRDFDIDGFRIDTVKHVNLEFWTQWATALDAYAAQQGRKDFFMFGEVYSADTSINAPYV
TQGRLDATLDFPFQEAARQYASQGGSAKRLASVFGDDYKYTTDKANAYEQVTFLGNHDMG
RIGSFLNQDNPEASDADLLKKGQLANELMFLSRGNPVVYYGDEQGFTGPGGDKDARQTMF
ASKVADYLDDDEIGTDRTHASDAYDTSAPLYKEIAALSKLRKDNPALADGVQTERYAADG
AGVYAFSRTSTGTDRTEYVVAFNNAGEAKTATFATGSADMAFRGIYGTSDSVTSGADKKV
TVTVPAGSAVVFKAAGKLGAPASKLSVTLKAPSAGATGTVEVSADVDGGQLNRVVFAAQT
GNGKWRTLGSADHAPYKVTQALGKDVPAGTPLRYKAVVIDSAGRTASATAASVTGTPPAE
EVPSASSRDYAIVHYKRTDGDYTDWRLYAWGDLADGESTPWPEGHDFIGRDAYGAFAYVK
LKPGASSVGFLVIDKDGNKDVSADRTIDVTRTGEVWVEQDKEAVLTERPEYPAQDKSKAV
LHYHRADGDHTGWGLHVWTGAATPTDWSKPLEPVKTDAYGAVFEVPLAEGATSLSYIIHK
GDEKDLPADQSLDLTANGHEVWLLNGQEKYLLPQPAGSAAALDLTTSKAVWIDRNTVAWN
GSEGAASTQLLYSRDGSIAVKDGALIGDARWLRLSKTSLTGAQKAKFPHLKDYTAWSVDP
RDRDRVRAALSGQVVASQRAANGAALAATGVQIAGVLDDLYDATKAELGPVFHRGRPTLA
VWAPTAQSVSLDLDGSTVAMKRDATTGVWSVTGKKSWTNKPYRYVVKVWAPSVRKVVTNK
VTDPYSVALTADSERSLIVDLDDTSLAPSGWSSLKKPQAVALKDAQIQELHIRDFSVEDK
TARHPGTYLAFTDKDSEGSRHLRRLAESGTSYVHLLPAFDIATIPEKKADQARTDCDLAS
YAPDSEKQQECVAKTAAKDAYNWGYDPYHYTVPEGSYATDPDGTARTVEFRKMVKSLNEE
GLRVVMDVVYNHTTSSGQADTSVLDKVVPGYYQRLLADGSVATSTCCANTAPENAMMGKL
VVDSIVTWAKEYKVDGFRFDLMGHHPKANILAVRKALDALTPAKDGVDGKKIILYGEGWN
FGEIADDARFTQATQKNMAGTGIATFSDRARDAVRGGGPFDEDPGIQGFASGLSTDPNSS
AANGTPAEQKARLLHYQDLIKVGLSGNLAQYRFTGTDGKEVKGSEVDYNGQPAGYADAPG
DALAYADAHDNESLFDALAFKLPGSTSASDRARMQVLAMATATLSQGPALSQAGSDLLRS
KSLDRNSYDSGDWFNAIHWNCQDGNGFGRGLPMAADNASKWPYATPLLTRVKVGCDQIEG
TSAAYRDLLRIRTAESAFGLSTADQVQSKLSFPLSGKDETPGVITMQLGDLVVVFNATPE
KQEQTIGALAGKGYALHPVQASGADPIVKSASYEAESGTFAVPGRTVAVFAR
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
ataccgagagggccggcgcgccgccgcctcaggctgcgcgcagccgtcctcgccgccgct
ctggccgtatcgcttgcgcaacccctcgcggcacgggccgagaccccgcccgcgcccccg
tccgacgcgaagctcgccgcggagcccgcgcggcacgacgcgacccgcgagcagttctac
ttcgtcctgccggaccgcttcgccaacggcgacacgtccaacgaccggggcggactcacc
gggtcacgcctggcgaccggctacgaccccaccgacaagggcttctaccagggcggcgac
ctcaagggcctgaccaagaggctcgactacatcaagggcctcggcaccaccgccatctgg
atggcgccgatcttcaagaaccggcccgtgcagggcaccggcaaggacgcctcggccggc
taccacggctactggatcaccgacttcacccaggtcgacccgcacttcggcaccaacaag
gacctcgagacgctgatctccaaggcccacgccaagggcatgaaggtcttcttcgacgtc
atcaccaaccacacggccgacgtcgtcgactacgaggagaagtcctacggctacctctcc
aagggcgccttcccgtatctgaccaaggacggcaggcccttcgacgacgccgactacgcg
gacggcgccggcacgttcccggccgtcgacgccgactccttcccccgtacgccggccgtc
cccgccgcgcagaaggacgccaaggtcccgtcgtggctcaacgacccgacgatgtaccac
aaccgcggtgactccaccttcgccggcgagagctccacgaacggtgacttctccggcctc
gacgacctgtggaccgagcgtcccgaggtggtcgagggcatggagaagatctacgagagg
tgggtcagggacttcgacatcgacggcttccggatcgacaccgtgaagcacgtcaacctg
gagttctggacgcagtgggccacggccctcgacgcgtacgcggcccagcagggccgcaag
gacttcttcatgttcggcgaggtctactccgccgacacctcgatcaacgctccgtacgtc
acccagggccgcctcgacgccacgctcgacttccccttccaggaggcggcccgccagtac
gcctcccagggcggcagcgcgaagaggctggcgtccgtcttcggtgacgactacaagtac
acgacggacaaggccaacgcgtacgagcaggtcaccttcctcggcaaccacgacatgggc
cgcatcgggtccttcctgaaccaggacaacccggaggcgagcgacgccgacctcctcaag
aagggccagctcgccaacgagctgatgttcctcagccgcggcaaccccgtcgtctactac
ggcgacgagcagggcttcaccggcccgggcggcgacaaggacgcccgccagacgatgttc
gcctccaaggtcgccgactacctcgacgacgacgagatcggcaccgaccgcacccacgcg
agtgacgcgtacgacacgagtgcaccgctctacaaggagatcgccgctctctccaagctc
cgcaaggacaaccccgccctggcggacggcgtccagacggagcggtacgccgccgacggc
gcgggggtttacgccttctcgcgtacgagcacgggcacggacaggaccgagtacgtcgtc
gccttcaacaacgccggcgaggcgaagacggcgaccttcgccaccggttcggcggacatg
gccttccgcggcatctacggcacctccgactcggtgaccagcggcgccgacaagaaggtc
accgtcaccgtcccggccggttcggcggtcgtcttcaaggcggcgggcaagctcggtgcc
ccggcgtcgaagctgtcggtcaccctgaaggccccgtccgcgggcgccaccggcaccgtc
gaggtgagcgcggatgtcgacggcggtcagctgaaccgcgtcgtcttcgccgcccagacc
ggcaacggcaagtggcggaccctcggctccgccgaccacgccccctacaaggtcacccag
gccctcggcaaggacgtaccggctggaacccccttgcgctacaaggcggttgtcatcgac
tcggccgggcggacggcgagcgcgacggccgcctcggtgacgggcaccccgcccgccgaa
gaggtccccagcgcctcctcgcgcgactacgcgatcgtccactacaagcgcaccgacggc
gactacaccgactggcggctgtacgcctggggcgacctcgccgacggggagtcgacgccc
tggcccgagggccacgacttcatcggccgggacgcctacggggccttcgcctacgtgaag
ctgaagccgggcgcctccagcgtgggcttcctcgtcatcgacaaggacggcaacaaggac
gtctccgccgaccgcacgatcgacgtcaccaggacgggcgaggtctgggtcgagcaggac
aaggaggccgtcctcacggagcggcccgagtacccggcacaggacaagtcgaaggcggtc
ctccactaccaccgtgcggatggcgaccacaccggctgggggctgcacgtctggacgggc
gcggcgacgcccacggactggtcgaaacccctggagccggtgaagactgacgcctatggc
gctgtgttcgaggtgccgctcgccgagggtgccaccagcctcagctacatcatccacaag
ggcgacgagaaggaccttccggccgaccagtcgctcgacctcaccgccaacggccatgag
gtgtggctgttgaacggccaggagaagtatctgctcccgcagcccgcgggcagtgcggcc
gcgctcgacctgaccacgtccaaagcggtctggatcgaccggaacacggtggcctggaac
ggctccgagggggccgcctccacgcagctgctgtactcccgcgacggctcgatcgcggtg
aaggacggcgcgctgatcggagatgcccgatggctccggctgtccaagacctctctcacc
ggcgcccagaaggcgaagtttccgcacctcaaggactacaccgcctggtccgtcgaccca
cgtgaccgcgaccgggtgcgtgctgccctgagcggtcaggtcgtcgcctcgcaacgggcg
gccaacggcgcggcgctggcggcgacaggcgtccagatcgccggcgtactggacgatctg
tacgacgcgacgaaggcggagctgggtccggtcttccaccgcggccgtcccacgctggcc
gtgtgggcgccgaccgcgcagtcggtgagcctcgacctcgacggctccacggtcgcgatg
aagcgggacgccacgaccggcgtctggtccgtcacgggcaagaagtcctggacgaacaag
ccctaccggtacgtcgtgaaggtgtgggcgccgagcgtccggaaggtcgtcaccaacaag
gtcaccgacccctactcggtggccctgaccgccgactccgagcgcagcctgatcgtcgac
ctggacgatacgtccctcgcgccgtccggctggtcctcgctcaagaagccccaggccgtg
gcgctgaaggacgcccagatccaggagctgcacatccgggacttctccgtcgaggacaag
acggcccggcaccccggcacctacctggccttcaccgacaaggacagcgaaggctcccgg
cacctcaggcggctggccgagtccggtacctcgtacgtgcacctgctgcccgcgttcgac
atcgcgaccatccccgagaagaaggccgaccaggcgagaaccgactgcgacctcgcctcg
tacgcccccgactccgagaagcagcaggagtgtgtcgcgaagaccgccgcgaaggacgcg
tacaactggggctacgacccgtaccactacacggtccctgagggctcgtacgcgaccgac
ccggacggcaccgcgcgcacggtggagttccgcaagatggtcaagtcgctcaacgaagag
ggtctgcgggtcgtcatggacgtggtctacaaccacacgacctcgagcggccaggccgac
acaagcgtgctcgacaaggtcgtgcccggctactaccagcggctcctcgcggacggcagc
gtggccacctccacctgctgcgccaacacggcaccggagaacgccatgatgggcaagctc
gtcgtggactcgatcgtcacctgggccaaggagtacaaggtcgacggcttccgcttcgac
ctcatgggccaccaccccaaggccaacatcctcgcggtcaggaaggccctcgacgcgctc
acccccgccaaggacggcgtcgacggcaagaagatcatcctgtacggcgagggctggaac
ttcggcgagatcgccgacgacgcccgcttcacgcaggccacccagaagaacatggccggg
accgggatcgcgaccttctccgaccgggcgcgtgacgccgtacgcggcggcggccccttc
gacgaagaccccggcatccagggcttcgcctccggcctgtccaccgaccccaactcctcg
gcagcaaacggcactccggccgagcagaaggcccggctgctgcactaccaggacctcatc
aaggtcggcctgagcggcaatctcgcccagtaccgcttcaccggcaccgacggcaaggag
gtcaagggctccgaggtcgactacaacgggcagcccgccggatatgcggacgcgcccgga
gacgcgctcgcctacgccgacgcgcacgacaacgagtcactgttcgacgcgctcgccttc
aagctgccgggcagcacgagcgcgagcgaccgggcccgtatgcaggtcctcgccatggcg
acggccaccctctcgcagggcccggccctctcccaggccggctccgacctgctgcgctcc
aagtccctcgaccgcaactcgtacgacagcggggactggttcaacgccatccactggaac
tgccaggacggcaacggcttcgggcgcggactgccgatggcggccgacaacgcgtccaag
tggccgtacgccacaccgctgctgacccgcgtcaaggttggctgcgaccagatcgagggc
acctcggccgcgtaccgcgacctgctgaggatccgtacggccgagagcgccttcggactc
tccacggcggaccaggtgcagtcgaagctctccttcccgctgtccgggaaggacgagacg
cccggggtgatcacgatgcaactcggcgacctcgtcgtcgtcttcaacgcgacgcccgag
aagcaggagcagacgatcggcgccctcgccggaaagggatacgcgctgcacccggtgcag
gcgtcgggcgcggaccctatcgtcaagtccgcgtcgtacgaagcggaatcgggcacgttc
gccgttccggggcgcacggtcgcggtcttcgcgcgctag
DBGET
integrated database retrieval system
