Streptomyces dengpaensis: C4B68_30570
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Entry
C4B68_30570 CDS
T06611
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
sdx
Streptomyces dengpaensis
Pathway
sdx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sdx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C4B68_30570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdx03400
]
C4B68_30570
DNA repair and recombination proteins [BR:
sdx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C4B68_30570
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C4B68_30570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_21
AAA_33
AAA_16
nSTAND1
AAA_22
APS_kinase
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
ATPase
Motif
Other DBs
NCBI-ProteinID:
AVH59370
UniProt:
A0A2L2MS22
LinkDB
All DBs
Position
6634411..6637449
Genome browser
AA seq
1012 aa
AA seq
DB search
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECGRPITRQSPQAIVDKVLELPEGSRFQVLSPLVRERKGEFVDLFADLQTKGYSRARV
DGQTIQLTEPPTLKKQEKHTIEVVVDRLTVKESAKRRLTDSVETALGLSGGMVVLDFVDL
PEDDPERERMYSEHLYCPYDDLSFEELEPRSFSFNSPFGACPECTGIGTRMEVDPELIVP
DEEKSLDEGALHPWSHGHTKDYFGRLIGALADALGFRTDIPFAGLPQRARKALLYGHKTQ
IEVRYRNRYGRERVYTTPFEGAVPFVKRRHSEAESDASRERFEGYMREVPCPTCEGTRLK
PLVLAVTVMEKSIAEVSAMSISDCADFLGELKLNARDKKIAERVLKEVNERLRFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DMGNTLIVVEHDEDTIKVADWVVDIGPGAGEHGGKVVHSGPLKELLANPESMTGQYLSGK
KEIALPDIRRPADPSRRLTVHGARENNLQDIDVSFPLGVLTAVTGVSGSGKSTLVNDILY
THLARELNGARNVPGRHTRVEGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ETTEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSISEVLDMPIEEALGFFEAVPAIARHLNTLNDVGLGYVRLGQSAPTLSGGEAQ
RVKLASELQKRSTGRTVYVLDEPTTGLHFEDISKLITVLSGLVDKGNTVIVIEHNLDVIK
TADWVVDMGPEGGNGGGLVIAEGTPEQVAGVSTSHTGKFLREVLGADRISDAAPVKAAGK
TAAKTVAAKSTAKRTATKTVNNTATKKAAAVTKNTAAKKATPAKKTTRARKA
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcatcgtccgtggagcgcgcgagcacaatctcaagaatgtctcgctc
gacctcccgcgcgactcgctcatcgtcttcacgggcttgtcggggtcgggcaagtcctcg
ctggccttcgacacgatcttcgccgaggggcagcggcgctacgtggagtcgctctcttcg
tacgcccggcagttcctcggtcagatggacaagccggacgtcgacttcatcgagggcctc
tccccggcagtgtccatcgaccagaagtcgacctcgcgcaacccgcgctcgacggtcggc
accatcaccgaggtctacgactatctgcgtctgctcttcgcgcgcatcggcaagccgcac
tgtcctgagtgcggccgcccgatcacgcgccagtcgccgcaggccatcgtcgacaaggtg
ctggagctgccggaggggagccgcttccaggtcctgtcaccgctggtgcgcgagcgtaag
ggcgagttcgtcgacctcttcgccgatctccagaccaaggggtacagccgcgccagggtc
gacggccagacgatccagctcaccgagccgcccacgctgaagaagcaggagaagcacacc
atcgaggtggtcgtcgaccgcctcaccgtgaaggagtccgccaagcgccgcctcaccgac
tccgtggagacggccctcggcctgtccggcggcatggtcgtgctcgacttcgtcgacctc
cctgaggacgaccccgagcgcgagcgcatgtactcggagcacctgtactgcccgtacgac
gacctgtccttcgaggagctggagccccgctccttctccttcaactcgcccttcggcgcc
tgccccgagtgcaccggtatcggtacgcgcatggaggtcgaccccgagctgatcgtcccg
gacgaggagaagtccctcgacgagggcgccctccacccctggtcgcacggacacaccaag
gactacttcggccggctcatcggagccctcgccgatgcgttgggattccggaccgacatc
cccttcgccgggcttccgcagcgcgccaggaaggcactcctctacgggcacaagacgcag
atcgaggtccgctaccgcaatcggtacggacgcgagcgcgtgtacaccacgcccttcgaa
ggcgccgtccccttcgtcaagcggcggcacagcgaggccgagagcgacgcgagccgtgag
cgcttcgagggctatatgcgcgaggtgccctgccccacctgtgagggcacgcgcctgaag
ccgctggtcctcgcggtcacggtcatggagaagtcgatcgccgaggtctccgcgatgtcc
atcagtgactgcgcggacttcctgggcgagctgaaactcaacgcgcgcgacaagaagatc
gccgagcgcgtcctgaaggaggtcaacgaacggctgcgcttcctggtcgacgtcggcctc
gactacctgtcgctgaaccgcgcggccggcaccctctccggcggtgaggcccagcgcatc
cgcctggccacccagatcggctccggactcgtcggcgtcctgtacgtcctcgacgagccg
tccatcggtctgcaccagcgcgacaaccaccggctgatcgagaccctggtccggctgcgc
gacatgggcaacacgctcatcgtcgtcgagcacgacgaggacaccatcaaggtcgccgac
tgggtcgtcgacatcggccccggcgcgggcgagcacggcggcaaggtcgtgcacagcggc
cccttgaaggagctgctcgccaaccccgagtcgatgaccggccagtacctgtcgggcaag
aaggagatcgcgcttccagacatccgccgccccgccgacccgagccgcaggctcacggtg
cacggcgcccgtgagaacaacctccaggacatcgacgtgtccttcccgctgggcgtcctc
acggccgtcaccggcgtctcgggctccggcaagtcgacgctggtcaacgacatcctgtac
acgcacctggcccgcgagctgaacggcgcgaggaacgtacccgggcggcacacgcgtgtg
gagggcgacgacctcgtcgacaaggtcgtgcacgtcgaccagtcgcccatcggccgtaca
ccccggtccaacccggcgacgtacaccggagtcttcgaccacgtccgcaagctgttcgcc
gagacgaccgaggcgaaggtgcggggctacctgcccggccgcttctccttcaacgtcaag
ggcggccgctgcgagaactgctccggcgacggcacgatcaagatcgagatgaacttcctg
ccggacgtgtacgtcccctgcgaggtctgccacggggcgcgctacaaccgggagaccctg
gaggtccactacaagggcaagtccatctccgaggtcctcgacatgccgatcgaggaagca
ctcggattcttcgaggccgtcccggcgatcgcccggcacctgaatacgctcaacgacgtg
ggcctcggctacgtccggctcggccagtccgcgccgacgctgtccggcggtgaggcacag
cgcgtcaagctcgcgagcgagctgcagaagcgctccacgggccgcacggtgtacgtgctc
gacgagccgaccaccggtctgcacttcgaggacatcagcaagctcatcacggtgctgtcc
ggcctggtcgacaagggcaacacggtcatcgtcatcgagcacaacctcgacgtcatcaag
accgcggactgggtcgtcgacatgggccccgagggtggcaacggcggcggtctcgtcatc
gccgagggcacccccgagcaggtcgccggcgtgtcgaccagccacaccggcaagttcctg
cgcgaggtcctcggcgccgaccggatcagcgacgccgccccggtgaaggccgcgggcaag
accgccgccaagacggtggcggccaagtcgacggcgaagagaacggccacgaagaccgtc
aacaacacggccaccaagaaggctgcagcggtcacgaagaatacggccgccaagaaggcg
acccccgcgaagaagaccacgcgggctcgcaaggcctga
DBGET
integrated database retrieval system