Shigella dysenteriae Sd197: SDY_0055
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Entry
SDY_0055 CDS
T00306
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00220
Arginine biosynthesis
sdy00240
Pyrimidine metabolism
sdy00250
Alanine, aspartate and glutamate metabolism
sdy01100
Metabolic pathways
sdy01110
Biosynthesis of secondary metabolites
sdy01240
Biosynthesis of cofactors
Module
sdy_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SDY_0055 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SDY_0055 (carB)
00220 Arginine biosynthesis
SDY_0055 (carB)
Enzymes [BR:
sdy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SDY_0055 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
ABB60293
ShiBASE_China:
SDY0055
UniProt:
Q32K64
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All DBs
Position
49571..52792
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AA seq
1073 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGVTA
DAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGG
IAYNREEFEEICARGLALSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVG
ITGLNAEFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDT
AYMYSTYEEECEANPSTDREKIMVLGGGSNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVP
VIGTSPDAIDRAEDRERFQHAVDRLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVL
GGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIME
HIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKF
PGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDL
AAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGR
RAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatataaaaagtatcctgattctgggtgcgggcccgattgttatc
ggtcaggcgtgtgagtttgactactctggcgcgcaagcatgtaaagccctgcgcgaagag
ggttaccgcgtcattctggtgaactccaacccggcgaccatcatgaccgacccggaaatg
gccgatgcgacctacatcgagccgattcactgggaagtggtacgcaagattattgaaaaa
gagcgcccggacgcggtgctgccaacgatgggcggtcagacggcgctgaactgcgcgctg
gagctggaacgtcagggcgtgttggaagagttcggcgtcaccatgattggtgtcactgcc
gatgcgattgataaagcagaagaccgccgtcgtttcgacgtagcgatgaagaaaattggt
ctggaaactgcgcgttccggtatcgcgcacacgatggaagaagcgctggcggttgccgct
gacgtgggcttcccgtgcattattcgcccatcctttaccatgggcggtagcggcggcggt
atcgcttataaccgtgaagagtttgaagaaatttgcgcccgcggtctggctctctctccg
accaaagagttgctgattgatgagtcgctgatcggctggaaagagtacgagatggaagtg
gtgcgtgataaaaacgacaactgcatcatcgtctgctctatcgaaaacttcgatgcgatg
ggcatccacaccggtgactccatcactgtcgcgccagcccaaacgctgaccgacaaagaa
tatcaaatcatgcgtaacgcctcgatggcggtgctgcgtgaaatcggcgttgaaaccggt
ggttccaatgtccagtttgcggtgaacccgaaaaacggtcgcctgattgttatcgaaatg
aacccacgcgtgtcccgttcttcggcgctggcgtcgaaagcgaccggtttcccgattgct
aaagtggcggcgaaactggcggtgggttacaccctcgacgaactgatgaacgacatcact
ggcggacgtactccggcctccttcgagccgtccatcgactatgtggttactaaaattcct
cgcttcaacttcgaaaaattcgccggtgctaacgaccgtctgaccactcagatgaaatcg
gttggcgaagtgatggcgattggtcgcacgcagcaggaatccctgcaaaaagcgctgcgc
ggcctggaagtcggtgcgactggattcgacccgaaagtgagcctggatgacccggaagcg
ttaaccaaaatccgtcgcgaactgaaagacgcaggcgcagagcgtatctggtacatcgcc
gatgctttccgcgcgggcctgtctgtggacggcgtcttcaacctgactaacattgaccgc
tggttcctggtacagattgaagaactggtgcgtctggaagagaaagtggcggaagtgggc
atcactggcctgaacgctgaattcctgcgccagctgaaacgcaaaggctttgccgatgcg
cgcttggcaaaactggcgggcgtacgcgaagcggaaatccgtaagctgcgtgaccaatat
gacctgcacccggtctacaagcgcgtggatacctgtgcggcagagtttgccaccgacacc
gcttacatgtactccacttatgaagaagagtgcgaagcgaatccgtctaccgaccgtgaa
aaaatcatggtgcttggcggcggttcaaaccgtatcggtcagggtatcgaattcgactac
tgctgcgtacacgcctcgctggcgctgcgtgaagacggttacgaaaccattatggttaac
tgtaacccggaaaccgtctctaccgactacgacacttccgatcgcctctacttcgagccg
gtaactctggaagatgtgctggaaatcgtgcgtattgagaagccgaaaggcgttatcgtt
cagtacggcggtcagaccccgctgaaactggcgcgtgcactggaagccgctggtgtaccg
gttatcggcaccagcccggatgctatcgaccgtgcggaagaccgtgaacgcttccagcat
gcggttgaccgtctgaaactgaaacaaccggcgaacgccaccgttactgctattgaaatg
gcagttgagaaggcaaaagagattggctacccgctggtggtgcgtccgtcttacgttctc
ggcggtcgggcgatggaaatcgtctatgacgaagctgacctgcgtcgctacttccagacg
gcggttagcgtgtctaacgatgcgccagtgttgctggatcatttccttgatgacgcagta
gaagttgacgtggatgccatctgcgacggcgaaatggtgctgattggcggcattatggag
cacatcgagcaggcgggcgtgcactccggtgactccgcatgttcgctgccagcgtacacc
ttaagtcaggaaattcaggatgtgatgcgccagcaggtgcagaaactggccttcgaattg
caggtgcgcggcctgatgaacgtgcagtttgcggtgaaaaacaacgaagtctacctgatt
gaagttaacccgcgtgcggcgcgtaccgttccgttcgtctccaaagccaccggcgtaccg
ctggcaaaagtggcggcgcgtgtgatggctggcaaatcgctggctgagcagggcgtaacc
aaagaagttatcccgccgtactactcggtgaaagaagtggtgctgccgttcaataaattc
ccgggcgttgacccgctgttagggccagaaatgcgctctaccggggaagtcatgggcgtg
ggccgcaccttcgctgaagcgtttgccaaagcgcagctgggcagcaactccaccatgaag
aaacacggtcgtgcgctgctttccgtgcgcgaaggcgataaagaacgcgtggtggacttg
gcggcaaaactgctgaaacagggcttcgagctggatgcgacccacggcacggcgattgtg
ctgggcgaagcgggtatcaatccgcgtctggtaaacaaggtgcatgaaggtcgtccgcac
attcaggaccgcatcaagaatggcgaatatacctacatcatcaacaccacttcaggtcgt
cgcgcgattgaagactcccgcgtgatccgtcgcagtgcgctgcaatataaagtgcattac
gacaccaccctgaacggcggatttgccaccgcgatggcgctgaatgccgatgcgaccgaa
aaagtaatttcggtgcaggaaatgcacgcgcagatcaaataa
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