Shigella dysenteriae Sd197: SDY_0059
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Entry
SDY_0059 CDS
T00306
Symbol
caiC
Name
(GenBank) probable crotonobetaine/carnitine-CoA ligase
KO
K02182
carnitine-CoA ligase [EC:
6.2.1.48
]
Organism
sdy
Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SDY_0059 (caiC)
Enzymes [BR:
sdy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.48 carnitine---CoA ligase
SDY_0059 (caiC)
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DAHP_snth_FXD
Response_reg
POTRA
Motif
Other DBs
NCBI-ProteinID:
ABB60297
ShiBASE_China:
SDY0059
UniProt:
Q32K60
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Position
complement(55024..56592)
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AA seq
522 aa
AA seq
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MDRGAMDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFY
TLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVT
SAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDT
AEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDEVYLTVMPAFHIDCQCTAAMA
AFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMIIRTLMVQPPSANDRQHRLREVMF
YLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRLGDKRRWPSIGRAGFCYEAEIRD
DHNRPLPAGEIGEICIKGVLGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFY
FVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETL
SEEEFFRFCEQNMAKFKVPSYLEIRKVLPRNCSGKIIRKNLK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggatagaggtgcaatggatatcattggcggacaacatctacgtcaaatgtgggacgat
ctagcggacgtttacggtcataaaacggcgctgatttgtgaatccagcggcggagtcgtt
aaccggtatagttatcttgagttaaatcaggagattaaccgcacggcaaacctgttttat
acgctggggattcgcaaaggcgacaaggttgcactacatctcgacaactgcccggaattt
atcttttgctggttcgggctggcaaaaattggcgcgattatggtgccgattaacgcccgc
ctgttacgcgaggaaagcgcgtggatcctgcaaaatagccaggcgtgcctgctggtgacc
agtgcgcaattctatcctatgtatcaacagattcagcaggaagatgccactcaattgcgg
cacatttgcctgacagatgtggcacttcccgctgatgatggcgtgagttcgtttactcaa
ctgaaaaatcaacaacctgccaccttgtgctatgcaccgccgctatcgactgacgatacg
gcggaaattctcttcacctccggtactacctcccgaccgaaaggtgtggtgattacccat
tacaacctgcgcttcgctggatattactccgcctggcagtgtgcactgcgtgacgatgag
gtctacctgacggtaatgcctgcgtttcatatcgattgccagtgtactgcggcgatggcg
gcgttttctgccggggccacctttgtgctggtcgagaaatacagcgcccgcgccttctgg
ggacaggtacagaagtaccgcgccaccattaccgaatgtattccgatgataattcgtacg
ttgatggtgcagccgccttcagcgaacgatcggcaacaccgcctgcgggaagtgatgttt
tatctcaacttgtcggagcaggaaaaagacgcattttgtgaacgcttcggcgttcgcttg
ctgacgtcttatgggatgacggaaaccattgtgggcattatcggcgatcgccttggcgat
aaacgacgctggccgtcgattggtcgggcggggttttgctacgaagcggagatccgcgac
gatcacaatcgcccgctcccggcaggtgagatcggtgaaatctgtattaaaggcgtacta
gggaaaaccatcttcaaagagtattttctcaacccgaaagccactgcaaaagtgctggaa
gctgatggctggctgcataccggcgataccggataccgcgacgaagagggctttttttat
ttcgtcgatcgccgctgcaatatgatcaaacgcggtggcgagaatgtctcctgcgtggag
ctggaaaatatcatcgccacccatccgaaaattcaggacatcgtggttgtgggtattaaa
gattcgattcgcgatgaagccatcaaagcatttgtggtgctgaatgaaggtgaaacattg
agcgaagaggaattttttcgcttctgcgaacaaaatatggcgaaatttaaagtgccctct
tatctggagatcagaaaagttctgccacgtaattgctcggggaaaataattagaaagaat
ctgaaataa
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