Shigella dysenteriae Sd197: SDY_0118
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Entry
SDY_0118 CDS
T00306
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00470
D-Amino acid metabolism
sdy00550
Peptidoglycan biosynthesis
sdy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SDY_0118 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SDY_0118 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdy01011
]
SDY_0118 (murD)
Enzymes [BR:
sdy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SDY_0118 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sdy01011
]
Precursor biosynthesis
Amino acid ligase
SDY_0118 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ABB60353
ShiBASE_China:
SDY0118
UniProt:
Q32K04
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All DBs
Position
117741..119057
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AA seq
438 aa
AA seq
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MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLND
EWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVT
TLVGEMAKAAGVNVGVGGNIGLPALMLLDDECELYVLELSSFQLETTSSLQAVAATILNV
TEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALTMPIRGADERCVSFGVNMGDYHL
NHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAALALADAAGLPRASSLKALTTFTGL
PHRFEVVLEHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKSADFSPLARYL
NGDNVRLYCFGRDGVQLAALRPEVAEKTETMEQAMRLLAPRVQPGDMVLLSPACASLDQF
KNFEQRGNEFARLAKELG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggctgattaccagggtaaaaatgttgtcattatcggcctgggcctcaccgggctttcc
tgcgtggactttttcctcgctcgcggtgtgacgccgcgcgttatggatacgcgtatgaca
ccgcctggcctggataaattacccgaagccgtagaacgccacacgggcagtctgaatgat
gaatggctgatggcggcagatctgattgtcgccagtcccggtattgcactggcgcatcca
tccttaagcgctgccgctgatgccggaatcgaaatcgttggcgatatcgagctgttctgt
cgcgaagcacaagcaccgattgtggcgattaccggttctaacggcaaaagcacggtcacc
acgctagtgggtgaaatggcgaaagcggcgggggttaacgttggtgtgggtggcaatatt
ggcctgcctgcgttgatgctactggatgatgagtgtgaactgtacgtgctggaactgtcg
agcttccagctggaaaccacctccagcttacaggcggtagcagcgaccattctgaacgtg
actgaagatcatatggatcgctatccgtttggtttacaacagtatcgtgcagcaaaactg
cgcatttacgaaaacgcgaaagtttgcgtggttaatgctgatgatgccttaacaatgccg
attcgcggtgcggatgaacgctgcgtcagctttggcgtcaacatgggtgactatcacctg
aatcatcagcagggcgaaacctggctgcgggtgaaaggcgagaaagtgctgaacgtgaaa
gaaatgaaactttccgggcagcataactacaccaatgcgctcgcagcactggcactggca
gacgcagctggtttgccgcgcgccagcagcctgaaagcattaaccacattcactggtctg
ccgcatcgctttgaagttgtgctggagcataacggcgtacgttggattaacgattcaaaa
gcaaccaacgtcggcagtacggaagcggcgctgaatggcctgcacgtagacggcacgctg
catttgttgctgggcggcgatggtaaatcggcggactttagcccactagcgcgttacctg
aatggcgataacgtacgtctgtattgtttcggtcgtgacggcgtgcagctggcggcgcta
cgcccggaagtggcagaaaaaaccgaaactatggaacaggcgatgcgcttgctggctccg
cgtgttcagccgggcgatatggttctactctccccggcctgtgccagccttgatcagttc
aagaactttgaacaacgaggcaatgagtttgcccgtctggcgaaggagttaggttga
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