Shigella dysenteriae Sd197: SDY_0146
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Entry
SDY_0146 CDS
T00306
Symbol
lpdA
Name
(GenBank) lipoamide dehydrogenase (NADH)
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy00010
Glycolysis / Gluconeogenesis
sdy00020
Citrate cycle (TCA cycle)
sdy00260
Glycine, serine and threonine metabolism
sdy00280
Valine, leucine and isoleucine degradation
sdy00310
Lysine degradation
sdy00380
Tryptophan metabolism
sdy00620
Pyruvate metabolism
sdy00630
Glyoxylate and dicarboxylate metabolism
sdy00640
Propanoate metabolism
sdy00670
One carbon pool by folate
sdy00785
Lipoic acid metabolism
sdy01100
Metabolic pathways
sdy01110
Biosynthesis of secondary metabolites
sdy01120
Microbial metabolism in diverse environments
sdy01200
Carbon metabolism
sdy01210
2-Oxocarboxylic acid metabolism
sdy01240
Biosynthesis of cofactors
Module
sdy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sdy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sdy_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SDY_0146 (lpdA)
00020 Citrate cycle (TCA cycle)
SDY_0146 (lpdA)
00620 Pyruvate metabolism
SDY_0146 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
SDY_0146 (lpdA)
00640 Propanoate metabolism
SDY_0146 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SDY_0146 (lpdA)
00280 Valine, leucine and isoleucine degradation
SDY_0146 (lpdA)
00310 Lysine degradation
SDY_0146 (lpdA)
00380 Tryptophan metabolism
SDY_0146 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SDY_0146 (lpdA)
00670 One carbon pool by folate
SDY_0146 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sdy04147
]
SDY_0146 (lpdA)
Enzymes [BR:
sdy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SDY_0146 (lpdA)
Exosome [BR:
sdy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SDY_0146 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
FAD_binding_2
HI0933_like
AlaDh_PNT_C
Thi4
NAD_binding_8
FAD_binding_3
DAO
Lycopene_cycl
FMO-like
Motif
Other DBs
NCBI-ProteinID:
ABB60380
ShiBASE_China:
SDY0146
UniProt:
Q32JX7
LinkDB
All DBs
Position
148315..149739
Genome browser
AA seq
474 aa
AA seq
DB search
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQ
LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGSNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaaatcaaaactcaggtcgtggtacttggggcaggccccgcaggttactcc
gctgccttccgttgcgctgatttaggtctggaaaccgtaatcgtagaacgttacaacacc
cttggcggtgtttgcctgaacgtcggctgtatcccttctaaagcactgctgcacgtagca
aaagttatcgaagaagccaaagcgctggctgaacacggtatcgtcttcggcgaaccgaaa
accgatattgacaagattcgtacctggaaagaaaaagtgatcaatcagctgaccggtggt
ctggctggtatggcgaaaggccgcaaagtcaaagtggtcaacggtctgggtaaatttacc
ggggctaacaccctggaagttgaaggtgagaacggtaaaaccgtgatcaacttcgacaac
gcgatcattgcagcgggttctcgcccgattcaactgccgtttattccgcatgaagatccg
cgtatctgggactccactgacgcgctggaactgaaagaagtaccagaacgcctgctggta
atgggtggcggtatcatcggtctggaaatgggcaccgtttaccacgcgctgggttcacag
attgacgtggttgaaatgttcgaccaggttatcccggcagctgacaaagacatcgttaaa
gtcttcaccaagcgtatcagcaagaaattcaacctgatgctggaaaccaaagttaccgcc
gttgaagcgaaagaagacggcatttatgtgacgatggaaggcaaaaaagcacccgctgaa
ccgcagcgttacgacgccgtgctggtagcgattggtcgtgtgccgaacggtaaaaacctc
gacgcaggcaaagctggcgtggaagttgacgaccgtggtttcatccgcgttgacaaacag
ctgcgtaccaacgtaccgcacatctttgctatcggcgatatcgtcggtcagccgatgctg
gcacacaaaggtgttcacgaaggtcacgttgccgctgaagttatcgccggtaagaaacac
tacttcgatccgaaagttatcccgtccatcgcctataccgaaccagaagttgcatgggta
ggtctgactgagaaagaagcgaaagagaaaggcatcagctatgaaaccgccaccttcccg
tgggctgcttctggtcgtgccatcgcttccgactgcgcagacggtatgaccaagctgatt
ttcgacaaagaatctcaccgtgtgatcggtggtgcgattgtcggtagcaacggcggcgag
ctgctgggtgaaatcggcctggcaatcgaaatgggttgtgacgctgaagacatcgcgctg
accatccatgcgcacccgactctgcacgagtctgtgggcctggcggcagaagtgttcgaa
ggtagcattaccgacctgccgaacccgaaagcgaagaagaagtaa
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