Shigella dysenteriae Sd197: SDY_0159
Help
Entry
SDY_0159 CDS
T00306
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SDY_0159 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdy03019
]
SDY_0159 (pcnB)
Enzymes [BR:
sdy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SDY_0159 (pcnB)
Messenger RNA biogenesis [BR:
sdy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SDY_0159 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
ABB60393
ShiBASE_China:
SDY0159
UniProt:
Q32JW4
LinkDB
All DBs
Position
complement(158058..159422)
Genome browser
AA seq
454 aa
AA seq
DB search
MLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRD
LLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNV
SDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGV
IRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESL
KLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIKQVLKNTDTRIHNDMR
VNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTR
DIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAP
PDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgctaagccgcgaggaaagcgaggctgaacaggcagtcgcccgtccacaggtgacggtg
atcccgcgtgagcagcatgctatttcccgcaaagatatcagtgaaaatgccctgaaggta
atgtacaggctcaataaagcgggatacgaagcctggctggttggcggcggcgtgcgcgac
ctgttacttggcaaaaagccgaaagactttgacgtaaccactaacgccacgcctgagcag
gtgcgcaaactgttccgtaactgccgcctggtgggtcgccgtttccgtctggctcatgtg
atgtttggcccggagattatcgaagttgcgaccttccgtggacaccacgaaggtaacgtc
agcgaccgcacgacctcccaacgcgggcaaaacggcatgttgctgcgcgacaacattttc
ggctccatcgaagaagacgcccagcgccgcgatttcactatcaacagcctgtattacagc
gtagcggattttaccgtccgtgattacgttggcggtatgaaggatctgaaggacggtgtt
atccgtctgattggtaacccggaaacgcgctaccgtgaagatccggtacgtatgctgcgc
gcagtacgttttgccgccaaattgggtatgcgcatcagcccggaaaccgcagaaccgatc
cctcgcctcgctaccctgctgaacgatatcccaccggcacgcctgtttgaagaatcgctt
aaactgctacaagcgggctacggttacgaaacctataagctgctgtgtgaatatcatctg
ttccagccgctgttcccgaccattacccgctacttcacggaaaatggcgacagcccgatg
gagcggatcattaaacaggtgctgaagaataccgatacgcgtatccataacgatatgcgc
gtgaacccggcgttcctgtttgccgccatgttctggtacccactgctggagacggcacag
aagatcgcccaggaaagcggcctgacctatcacgacgctttcgcgctggcgatgaacgac
gtgctggacgaagcctgccgttcactggcaatcccgaaacgcctgacgacattaacccgc
gatatctggcagttgcagttgcgtatgtcccgacgtcagggtaaacgcgcatggaaactg
ctggagcatcctaagttccgtgcggcttatgacctgttggccttgcgagctgaagttgag
cgtaacgctgaactgcagcgtctggtgaaatggtggggtgagttccaggtttccgcgcca
ccagaccaaaaagggatgctcaacgagctggatgaagaaccgtcaccgcgtcgtcgtact
cgtcgtccacgcaaacgcgcaccacgtcgtgagggtaccgcatga
DBGET
integrated database retrieval system
