Shigella dysenteriae Sd197: SDY_0163
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Entry
SDY_0163 CDS
T00306
Symbol
yadP
Name
(GenBank) conserved hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sdy
Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdy03016
]
SDY_0163 (yadP)
Enzymes [BR:
sdy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SDY_0163 (yadP)
Transfer RNA biogenesis [BR:
sdy03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SDY_0163 (yadP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ABB60397
ShiBASE_China:
SDY0163
UniProt:
Q32JW0
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All DBs
Position
complement(161830..162369)
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AA seq
179 aa
AA seq
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MPHMSDPQRLFFAIDLPAEIREQIIHWRATHFPLEAGRPVAADNLHLTLAFLGEVSAEKE
KALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQSARSGCFQ
SNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcacatgtctgacccgcaacgtctgttctttgctatcgacttacctgcagaaatc
cgcgaacagattatccactggcgcgccacacacttcccacttgaggcgggacgtccggtc
gccgccgataatttgcatctgactctggcatttttaggcgaagtgagcgccgagaaagag
aaggcgctttctcttttagccggacggattcgtcaacctggtttcacactcacgcttgat
gacgccggacaatggctgcgttcgcgtgtggtgtggctagggatgcgtcagcctccacgc
ggcttaatccagctggcgaatatgctccgttcacagtctgcccgcagcggttgttttcaa
agcaatcgtccgtttcatccacatattaccttattgcgcgacgccagcgaggcggtgaca
atcccgccgccaggttttaactggtcgtatgcggtgacagagttcaccctttacgcctcc
tcgtttgcccgtggacgcacacgctacacgccgctaaaacgctgggcgctaacgcaataa
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