KEGG   Shigella dysenteriae Sd197: SDY_0163
Entry
SDY_0163          CDS       T00306                                 
Symbol
yadP
Name
(GenBank) conserved hypothetical protein
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
sdy  Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:sdy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sdy03016]
    SDY_0163 (yadP)
Enzymes [BR:sdy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     SDY_0163 (yadP)
Transfer RNA biogenesis [BR:sdy03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    SDY_0163 (yadP)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: ABB60397
ShiBASE_China: SDY0163
UniProt: Q32JW0
LinkDB
Position
complement(161830..162369)
AA seq 179 aa
MPHMSDPQRLFFAIDLPAEIREQIIHWRATHFPLEAGRPVAADNLHLTLAFLGEVSAEKE
KALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQSARSGCFQ
SNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ
NT seq 540 nt   +upstreamnt  +downstreamnt
gtgcctcacatgtctgacccgcaacgtctgttctttgctatcgacttacctgcagaaatc
cgcgaacagattatccactggcgcgccacacacttcccacttgaggcgggacgtccggtc
gccgccgataatttgcatctgactctggcatttttaggcgaagtgagcgccgagaaagag
aaggcgctttctcttttagccggacggattcgtcaacctggtttcacactcacgcttgat
gacgccggacaatggctgcgttcgcgtgtggtgtggctagggatgcgtcagcctccacgc
ggcttaatccagctggcgaatatgctccgttcacagtctgcccgcagcggttgttttcaa
agcaatcgtccgtttcatccacatattaccttattgcgcgacgccagcgaggcggtgaca
atcccgccgccaggttttaactggtcgtatgcggtgacagagttcaccctttacgcctcc
tcgtttgcccgtggacgcacacgctacacgccgctaaaacgctgggcgctaacgcaataa

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