Shigella dysenteriae Sd197: SDY_0415
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Entry
SDY_0415 CDS
T00306
Symbol
ybbI
Name
(GenBank) putative transcriptional regulator
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
sdy
Shigella dysenteriae Sd197
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdy03000
]
SDY_0415 (ybbI)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sdy01504
]
SDY_0415 (ybbI)
Transcription factors [BR:
sdy03000
]
Prokaryotic type
Helix-turn-helix
MerR family
SDY_0415 (ybbI)
Antimicrobial resistance genes [BR:
sdy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
SDY_0415 (ybbI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
Tup_N
DUF1836
Phytochelatin
Motif
Other DBs
NCBI-ProteinID:
ABB60626
ShiBASE_China:
SDY0415
UniProt:
Q32J81
LinkDB
All DBs
Position
complement(397196..397603)
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AA seq
135 aa
AA seq
DB search
MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNL
EESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMRNQLLALANACPGDDSSDC
PIIENLSGCCHHRAG
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgaacattagcgatgtagcaaaaattaccggcctgaccagcaaagccattcgcttctat
gaagagaaggggctggtgacgccgccgatgcgcagcgaaaatggttatcgaacctacacg
cagcagcatctcaacgaattgaccttactgcgccaggcgcgccaggtgggctttaacctg
gaagagagcggcgagctggtgaatctgtttaacgacccgcagcgtcacagtgccgacgtc
aaacgtcgcacgctggagaaggtagcggagatcgaacggcatatcgaagaactgcaatcc
atgcgcaaccagctactggcgctggcgaatgcctgccccggtgatgacagctccgactgc
ccgattatcgaaaatctctccggctgctgtcatcatcgggcggggtga
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