Shigella dysenteriae Sd197: SDY_0861
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Entry
SDY_0861 CDS
T00306
Symbol
ompC
Name
(GenBank) outer membrane protein 1b
KO
K09475
outer membrane pore protein C
Organism
sdy
Shigella dysenteriae Sd197
Pathway
sdy01501
beta-Lactam resistance
sdy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sdy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SDY_0861 (ompC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SDY_0861 (ompC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdy02000
]
SDY_0861 (ompC)
Transporters [BR:
sdy02000
]
Other transporters
Pores ion channels [TC:
1
]
SDY_0861 (ompC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
DUF4912
Motif
Other DBs
NCBI-ProteinID:
ABB61039
ShiBASE_China:
SDY0861
UniProt:
Q32I16
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All DBs
Position
810258..811385
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AA seq
375 aa
AA seq
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MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDDKSVDGDQTYMRLG
FKGETQVTDQLTGYGQWEYQIQGNAPESENNSWTRVAFAGLKFQDIGSIDYGRNYGVVYD
VTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFGLVDGLNFAVQYQGQNGSVSGE
NDPDFTGHGITNNGRKALRQNGDGVGGSITYDYEGFGIGGAISSSKRTWDQNNTGLIGTG
DRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSLGWANKAQNFEAVAQYQFDFGLRPSL
AYLQSKGKNLGVINGRNYDDEDILKYVDVGATYYFNKNMSTYVDYKINLLDDNQFTRDAG
INTDNIVALGLVYQF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaaagtactgtccctcctggtcccagctctgctggtagcaggcgcagcaaac
gctgctgaagtttacaacaaagacggcaacaaattagatctgtacggtaaagtagacggc
ctgcactatttctctgacgacaagtctgtagatggcgaccagacctacatgcgtcttggc
ttcaaaggtgaaactcaggttactgaccagctgaccggttacggccagtgggaatatcag
atccagggcaacgctccggaaagcgaaaacaactcctggacccgtgtggcatttgctggt
cttaaattccaggacatcggttctatcgactatggtcgtaactacggcgtagtttacgac
gtaacttcctggaccgacgtactgccagaattcggtggcgacacttacggttctgacaac
tttatgcagcagcgtggtaacggcttcgcgacctaccgtaacactgacttcttcggtctg
gttgatggcctgaactttgctgttcagtaccagggccagaatggcagcgtaagcggtgaa
aatgatccggatttcactggtcatggcatcaccaacaatggtcgtaaagctctgcgtcag
aacggcgacggcgttggcggatctatcacttatgattacgaaggctttggtatcggtggt
gcgatctccagctccaaacgtacctgggatcagaacaacactggtctgatcggtactggc
gaccgtgctgaaacctacaccggtggtctgaaatacgacgctaacaacatctacctggct
gctcagtacacccagacctacaacgcaactcgcgtaggttccttgggttgggcgaacaaa
gcacagaacttcgaagctgttgctcagtaccagttcgacttcggtctgcgtccgtccctg
gcttacctgcagtctaaaggtaaaaacctgggtgtcatcaatggtcgtaactacgacgac
gaagatatcctgaaatatgttgatgttggtgcgacctactacttcaacaaaaacatgtcc
acctatgttgactacaaaatcaacctgctggacgacaaccagttcactcgtgacgctggc
atcaacactgataacatcgtagctctgggtctggtttaccagttctaa
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